Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682120
Identifier: 182682120
GI number: 182682120
Start: 1772411
End: 1772959
Strand: Reverse
Name: 182682120
Synonym: XfasM23_1598
Alternate gene names: NA
Gene position: 1772959-1772411 (Counterclockwise)
Preceding gene: 182682121
Following gene: 182682119
Centisome position: 69.92
GC content: 38.43
Gene sequence:
>549_bases TTGGAGCGTGTTTTGAACATTAAACTCAAAGAATATAAAGAATATATTGCTGCGCATCATTATTATGTTATTGGAGTATT TATCTTCTTGCCGATGATTGTCAGTAAAATCGCAATATTGATCGGGGTGGCCAATATTGGTTTTGTTTCCCCATGGGAAA TATCTTATCGGACGGCATTCGGCGGTGCCGAGGGGTATACCCTGACAATGGTGATGTATTGGGTGATGTCGCCTCTTGCG TTTTTGTGGTTACATTCACAAGCGAATTACCCAGGTATGTCTTTGAGAAAAGCGATTATTCTGCTTCCTGCAGCATGGTT TCTGTCAATTATTTGTGGAGGTGGCATGATTGAAAATATGTCTGTTGACTATCTTACTAAGGCATCAGCTTATACTGTGG GAAGACGATTTTCAGGTCAACTATTTTTCTCATTGGGGGAATCGCATTTTGGTTTTTGTATGATATACGCGATGCTTGTT TTTATGTGTGTTGCAATTTGGTATTGCACATTATCTTTAACGTTGCGTTTAATTTTTAAGAGACTTTAA
Upstream 100 bases:
>100_bases GGAGTGCCTAGATCACTCCGAAGGAATCTATTTAGTATGTTTATTGACAGAAAGACACCACGGAGTGTGTTGAGATTCTT TCATGGTGAACCTTACATCT
Downstream 100 bases:
>100_bases TAGGAGTGATAGCGTCATGAGTAATAATACGGAAGATACAGGTAAAGCAACATCTCATCAGATGGATGACAGTACTTTCA ATGAGTGGAGCGAAGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEISYRTAFGGAEGYTLTMVMYWVMSPLA FLWLHSQANYPGMSLRKAIILLPAAWFLSIICGGGMIENMSVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCMIYAMLV FMCVAIWYCTLSLTLRLIFKRL
Sequences:
>Translated_182_residues MERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEISYRTAFGGAEGYTLTMVMYWVMSPLA FLWLHSQANYPGMSLRKAIILLPAAWFLSIICGGGMIENMSVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCMIYAMLV FMCVAIWYCTLSLTLRLIFKRL >Mature_182_residues MERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEISYRTAFGGAEGYTLTMVMYWVMSPLA FLWLHSQANYPGMSLRKAIILLPAAWFLSIICGGGMIENMSVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCMIYAMLV FMCVAIWYCTLSLTLRLIFKRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20740; Mature: 20740
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEISYRTAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC GGAEGYTLTMVMYWVMSPLAFLWLHSQANYPGMSLRKAIILLPAAWFLSIICGGGMIENM CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCC SVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCMIYAMLVFMCVAIWYCTLSLTLRLIFK CHHHHHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RL HC >Mature Secondary Structure MERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEISYRTAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC GGAEGYTLTMVMYWVMSPLAFLWLHSQANYPGMSLRKAIILLPAAWFLSIICGGGMIENM CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCC SVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCMIYAMLVFMCVAIWYCTLSLTLRLIFK CHHHHHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RL HC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA