Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is gtaB [H]
Identifier: 182682056
GI number: 182682056
Start: 1705923
End: 1706813
Strand: Reverse
Name: gtaB [H]
Synonym: XfasM23_1534
Alternate gene names: 182682056
Gene position: 1706813-1705923 (Counterclockwise)
Preceding gene: 182682057
Following gene: 182682055
Centisome position: 67.31
GC content: 50.39
Gene sequence:
>891_bases ATGATTAAGCGTATTCGCAAGGCTGTTTTCCCTGTGGCCGGTCTTGGTACACGTTTTTTGCCAGCGACCAAAACCATCCC CAAGGAAATGCTGCCAATTATTGATAAACCCCTCATCCAGTACGCGGTTGACGAAGCGATCCAGGCTGGATGCGATACCC TTGTGTTTGTGACCAACCGTTACAAGCATGCGGTGGCCGATTACTTCGACAAAGCGTATGAATTGGAGCAGAAGCTTGAG CGTGCCGGTAAATATGAGCAGCTGGAATTAGTGCGTCATGTGTTGCCTGATGGAGTGCGTACGGTTTTCGTGACTCAAAC TGAAGCGCTGGGTCTAGGCCATGCAGTGTTGTGCGCCAAGCCTGTGGTGGGTGATGAACCATTTGCGGTGTTGCTGCCAG ACGATCTCATGTGGAGTCGTAATGGAGGTGCACTGAAACAAATGGCTGATGTTGCTGAAGTCTCCGGTAGCAGTGTCATT GCAGTAGAGGATGTCCCCGTCGATAAAACCGTTAACTATGGCATCGTCGGAACGGATGTGTTTGATGGATGCAAGGGCCG CATTACTCAAATCGTCGAAAAGCCTAAGCCCGACGATGCACCGAGCAATCTTGCTGTGGTGGGGCGCTATGTCCTGAGTG GCAAGATATTCGAGATGCTTGAAAACACCTCTATCGGTACTGGCGGCGAGATTCAATTGACTGATGCGATCGCTGAATTA CTGAAATACGAGAGAGTGGATGCATACCGCTTCCAAGGTCGCCGATTTGATTGTGGTGCACACATTGGTCTGATTGAGGC TACCCTGCATTTAGCCCTTGAACACAAGAAACATGGTCAGGCGGTGCGTGAGATCCTGCGTGACACATTACTTACGGTCG ACAAGAGATAA
Upstream 100 bases:
>100_bases TTAGTATGTTGATGCCAGATTTCCATGCTGCACGTCATAAAAAAGAAACAAGATTCGAAACAGTTGTCCCATTCCCAGCA CGTGAGGTCAGAAGACTGTA
Downstream 100 bases:
>100_bases TTATCAGTATTTGCTTCGGTTTGCGTAAAGATGCTTATCGTACGTCGTCCTTTTTTGGACGACGTACCTCCAGGCTGCTT GGGAGACCTAAGAAGTTCCT
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MIKRIRKAVFPVAGLGTRFLPATKTIPKEMLPIIDKPLIQYAVDEAIQAGCDTLVFVTNRYKHAVADYFDKAYELEQKLE RAGKYEQLELVRHVLPDGVRTVFVTQTEALGLGHAVLCAKPVVGDEPFAVLLPDDLMWSRNGGALKQMADVAEVSGSSVI AVEDVPVDKTVNYGIVGTDVFDGCKGRITQIVEKPKPDDAPSNLAVVGRYVLSGKIFEMLENTSIGTGGEIQLTDAIAEL LKYERVDAYRFQGRRFDCGAHIGLIEATLHLALEHKKHGQAVREILRDTLLTVDKR
Sequences:
>Translated_296_residues MIKRIRKAVFPVAGLGTRFLPATKTIPKEMLPIIDKPLIQYAVDEAIQAGCDTLVFVTNRYKHAVADYFDKAYELEQKLE RAGKYEQLELVRHVLPDGVRTVFVTQTEALGLGHAVLCAKPVVGDEPFAVLLPDDLMWSRNGGALKQMADVAEVSGSSVI AVEDVPVDKTVNYGIVGTDVFDGCKGRITQIVEKPKPDDAPSNLAVVGRYVLSGKIFEMLENTSIGTGGEIQLTDAIAEL LKYERVDAYRFQGRRFDCGAHIGLIEATLHLALEHKKHGQAVREILRDTLLTVDKR >Mature_296_residues MIKRIRKAVFPVAGLGTRFLPATKTIPKEMLPIIDKPLIQYAVDEAIQAGCDTLVFVTNRYKHAVADYFDKAYELEQKLE RAGKYEQLELVRHVLPDGVRTVFVTQTEALGLGHAVLCAKPVVGDEPFAVLLPDDLMWSRNGGALKQMADVAEVSGSSVI AVEDVPVDKTVNYGIVGTDVFDGCKGRITQIVEKPKPDDAPSNLAVVGRYVLSGKIFEMLENTSIGTGGEIQLTDAIAEL LKYERVDAYRFQGRRFDCGAHIGLIEATLHLALEHKKHGQAVREILRDTLLTVDKR
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=294, Percent_Identity=45.9183673469388, Blast_Score=243, Evalue=9e-66, Organism=Escherichia coli, GI1788355, Length=287, Percent_Identity=44.2508710801394, Blast_Score=221, Evalue=5e-59, Organism=Escherichia coli, GI1788351, Length=287, Percent_Identity=26.8292682926829, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1790224, Length=277, Percent_Identity=25.9927797833935, Blast_Score=71, Evalue=9e-14, Organism=Caenorhabditis elegans, GI133931050, Length=223, Percent_Identity=31.8385650224215, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32627; Mature: 32627
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRIRKAVFPVAGLGTRFLPATKTIPKEMLPIIDKPLIQYAVDEAIQAGCDTLVFVTNR CHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH YKHAVADYFDKAYELEQKLERAGKYEQLELVRHVLPDGVRTVFVTQTEALGLGHAVLCAK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCHHHCCC PVVGDEPFAVLLPDDLMWSRNGGALKQMADVAEVSGSSVIAVEDVPVDKTVNYGIVGTDV CCCCCCCEEEEECCHHEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECHH FDGCKGRITQIVEKPKPDDAPSNLAVVGRYVLSGKIFEMLENTSIGTGGEIQLTDAIAEL HCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHH LKYERVDAYRFQGRRFDCGAHIGLIEATLHLALEHKKHGQAVREILRDTLLTVDKR HHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKRIRKAVFPVAGLGTRFLPATKTIPKEMLPIIDKPLIQYAVDEAIQAGCDTLVFVTNR CHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH YKHAVADYFDKAYELEQKLERAGKYEQLELVRHVLPDGVRTVFVTQTEALGLGHAVLCAK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCHHHCCC PVVGDEPFAVLLPDDLMWSRNGGALKQMADVAEVSGSSVIAVEDVPVDKTVNYGIVGTDV CCCCCCCEEEEECCHHEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECHH FDGCKGRITQIVEKPKPDDAPSNLAVVGRYVLSGKIFEMLENTSIGTGGEIQLTDAIAEL HCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHH LKYERVDAYRFQGRRFDCGAHIGLIEATLHLALEHKKHGQAVREILRDTLLTVDKR HHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]