Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is guaB [H]
Identifier: 182682054
GI number: 182682054
Start: 1703241
End: 1704698
Strand: Reverse
Name: guaB [H]
Synonym: XfasM23_1532
Alternate gene names: 182682054
Gene position: 1704698-1703241 (Counterclockwise)
Preceding gene: 182682055
Following gene: 182682053
Centisome position: 67.23
GC content: 52.4
Gene sequence:
>1458_bases ATGCTGCGCATCTTGGCTGAAGCTTTGACTTACGACGATGTTTCACTCGTCCCTTCCCATTCGACCGTCCTGCCCAAGGA TGTCAAGCTCGAAACCCGGTTGACACGCAATATCAGGCTCAAATTGCCGATCCTTTCAGCGGCGATGGACACCGTCACAG AAGCTCGTTTGGCGATCGTCATGGCGCAGCTTGGCGGGATTGGCATCATCCACAAAAACCTTACCATCGAACAGCAAGTC GCTGAGGTCACTAAAGTCAAGAAATACGAATCTGGCGTCATTCGTGATCCGATTACAGTTGATCCAGAGACATCAATTCG CGATGTGTTAGCACTGACCCGTGCCAAGAACATTTCTGGTGTCCCTGTTGTTGATAAAGGTCAATTAATTGGCCTCGTGA CTCACCGCGATATGCGCTTTGAAAGGGAGCTTGATGACCCCGTGCGCCATATCATGACTAAAAAAGAAGCCCTGGTGACA GTCAAAGAAGGGGCCGACTCCCAAGAGGTACTCCAACTGCTGCATAAACATCGCATCGAAAAGATATTGGTTGTGAACGA TGCTTTTGAACTGCGCGGCCTCATCACTGTTAAAGATATTCAAAAAAAATCCGACTATCCCAACGCAGCCAAAGATGCAG TGACCCGCTTGCTGGTTGGCGCTGCTGTGGGTGTAGGGGGAGAGACTGAAAAGCGCGTTGAGACATTGGCTACTGCTGGA GTGGATGTGATCATTGTCGATACTGCGCATGGTTATTCTCAGGGTGTGCTTGATCGTGTGGCTTGGATCAAGCGTTACTT CCCGCAACTACAAGTGATTGGCGGCAATATTGTGACTGGTGATGCTGCCTTGGCACTGATGGATGTCGGTGCCGATGCAG TGAAGGTGGGTGTCGGTCCCGGCTCCATTTGTACAACGCGAATGGTGGCAGGTGTTGGTGTGCCGCAGATCACCGCTGTG CAGATGGTTTCCGACGCGCTGCAAGATCGCATTCCGCTGATTGCTGACGGCGGTATCCGCTATTCCGGTGATATTGGCAA GGCATTAGCTGCAGGCGCATCAACCGTCATGATCGGTGGTTTGTTTGCAGGGACTGAGGAAGCTCCCGGTGATGTTGAGT TGTTCCAGGGGCGCACTTACAAAAGCTATCGCGGCATGGGTTCTTTGGCGGCGATGGAAAAGGGCTCCAAAGATCGCTAT TTCCAGGAAGCGAGCGACGTTGACAAACTGGTCCCGGAAGGCATTGAAGGACGTGTGCCTTACCGTGGTTCAGTCAGTGG CATCGTGCATCAGCTGATGGGCGGCTTGCGTGCCACCATGGGGTATGTTGGCTGCGCAACAATCGAAGAGATGCGTACCA AACCCCAGTTTGTGAAAATCACTGGGGCCGGTCAGGTTGAGAGTCACGTTCATGACGTGCAAATCACCAAAGAGCCGCCG AATTATCGGATGCGCTGA
Upstream 100 bases:
>100_bases TGCGCACGTTGCAAGGTGTCATTAACATAGGCCCTTAGTGTCGATCCGAGAGATTTCGGCGTAAAATTAAGCATTACCTA AAACTTTCTCGGATCTGCCG
Downstream 100 bases:
>100_bases GTCTCAGTGATGCCCCACAGAGCCTCTGCCTGTCTTTCGCGACCTTGTTGGTCGTCATCCGTATCAATCGTTGTGGCATT TTGTATTGTTGTGTTTTGTG
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MLRILAEALTYDDVSLVPSHSTVLPKDVKLETRLTRNIRLKLPILSAAMDTVTEARLAIVMAQLGGIGIIHKNLTIEQQV AEVTKVKKYESGVIRDPITVDPETSIRDVLALTRAKNISGVPVVDKGQLIGLVTHRDMRFERELDDPVRHIMTKKEALVT VKEGADSQEVLQLLHKHRIEKILVVNDAFELRGLITVKDIQKKSDYPNAAKDAVTRLLVGAAVGVGGETEKRVETLATAG VDVIIVDTAHGYSQGVLDRVAWIKRYFPQLQVIGGNIVTGDAALALMDVGADAVKVGVGPGSICTTRMVAGVGVPQITAV QMVSDALQDRIPLIADGGIRYSGDIGKALAAGASTVMIGGLFAGTEEAPGDVELFQGRTYKSYRGMGSLAAMEKGSKDRY FQEASDVDKLVPEGIEGRVPYRGSVSGIVHQLMGGLRATMGYVGCATIEEMRTKPQFVKITGAGQVESHVHDVQITKEPP NYRMR
Sequences:
>Translated_485_residues MLRILAEALTYDDVSLVPSHSTVLPKDVKLETRLTRNIRLKLPILSAAMDTVTEARLAIVMAQLGGIGIIHKNLTIEQQV AEVTKVKKYESGVIRDPITVDPETSIRDVLALTRAKNISGVPVVDKGQLIGLVTHRDMRFERELDDPVRHIMTKKEALVT VKEGADSQEVLQLLHKHRIEKILVVNDAFELRGLITVKDIQKKSDYPNAAKDAVTRLLVGAAVGVGGETEKRVETLATAG VDVIIVDTAHGYSQGVLDRVAWIKRYFPQLQVIGGNIVTGDAALALMDVGADAVKVGVGPGSICTTRMVAGVGVPQITAV QMVSDALQDRIPLIADGGIRYSGDIGKALAAGASTVMIGGLFAGTEEAPGDVELFQGRTYKSYRGMGSLAAMEKGSKDRY FQEASDVDKLVPEGIEGRVPYRGSVSGIVHQLMGGLRATMGYVGCATIEEMRTKPQFVKITGAGQVESHVHDVQITKEPP NYRMR >Mature_485_residues MLRILAEALTYDDVSLVPSHSTVLPKDVKLETRLTRNIRLKLPILSAAMDTVTEARLAIVMAQLGGIGIIHKNLTIEQQV AEVTKVKKYESGVIRDPITVDPETSIRDVLALTRAKNISGVPVVDKGQLIGLVTHRDMRFERELDDPVRHIMTKKEALVT VKEGADSQEVLQLLHKHRIEKILVVNDAFELRGLITVKDIQKKSDYPNAAKDAVTRLLVGAAVGVGGETEKRVETLATAG VDVIIVDTAHGYSQGVLDRVAWIKRYFPQLQVIGGNIVTGDAALALMDVGADAVKVGVGPGSICTTRMVAGVGVPQITAV QMVSDALQDRIPLIADGGIRYSGDIGKALAAGASTVMIGGLFAGTEEAPGDVELFQGRTYKSYRGMGSLAAMEKGSKDRY FQEASDVDKLVPEGIEGRVPYRGSVSGIVHQLMGGLRATMGYVGCATIEEMRTKPQFVKITGAGQVESHVHDVQITKEPP NYRMR
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=42.5311203319502, Blast_Score=357, Evalue=1e-98, Organism=Homo sapiens, GI217035146, Length=480, Percent_Identity=41.875, Blast_Score=342, Evalue=4e-94, Organism=Homo sapiens, GI156616279, Length=483, Percent_Identity=41.6149068322981, Blast_Score=342, Evalue=6e-94, Organism=Homo sapiens, GI34328928, Length=480, Percent_Identity=41.875, Blast_Score=342, Evalue=6e-94, Organism=Homo sapiens, GI34328930, Length=483, Percent_Identity=41.6149068322981, Blast_Score=342, Evalue=7e-94, Organism=Homo sapiens, GI217035152, Length=476, Percent_Identity=41.3865546218487, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI217035148, Length=480, Percent_Identity=41.0416666666667, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI217035150, Length=480, Percent_Identity=38.75, Blast_Score=301, Evalue=8e-82, Organism=Homo sapiens, GI50541956, Length=246, Percent_Identity=37.3983739837398, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI50541954, Length=246, Percent_Identity=37.3983739837398, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541952, Length=246, Percent_Identity=37.3983739837398, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541948, Length=246, Percent_Identity=37.3983739837398, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI156104880, Length=222, Percent_Identity=40.0900900900901, Blast_Score=162, Evalue=6e-40, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=61.1111111111111, Blast_Score=558, Evalue=1e-160, Organism=Escherichia coli, GI1786293, Length=255, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=3e-35, Organism=Caenorhabditis elegans, GI71994385, Length=500, Percent_Identity=39, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=41.7061611374408, Blast_Score=279, Evalue=3e-75, Organism=Caenorhabditis elegans, GI17560440, Length=255, Percent_Identity=34.9019607843137, Blast_Score=165, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6323585, Length=487, Percent_Identity=39.4250513347023, Blast_Score=332, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=38.9233954451346, Blast_Score=329, Evalue=6e-91, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=39.7515527950311, Blast_Score=319, Evalue=6e-88, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=38.7573964497041, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6319353, Length=141, Percent_Identity=37.5886524822695, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI24641071, Length=482, Percent_Identity=42.1161825726141, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI24641073, Length=482, Percent_Identity=42.1161825726141, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI28571163, Length=440, Percent_Identity=43.1818181818182, Blast_Score=313, Evalue=2e-85,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52316; Mature: 52316
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRILAEALTYDDVSLVPSHSTVLPKDVKLETRLTRNIRLKLPILSAAMDTVTEARLAIV CHHHHHHHHCCCCCEECCCCCCCCCCCCEEHEEECCCEEEEEHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTIEQQVAEVTKVKKYESGVIRDPITVDPETSIRDVLALTRAKNISG HHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCCCC VPVVDKGQLIGLVTHRDMRFERELDDPVRHIMTKKEALVTVKEGADSQEVLQLLHKHRIE CCEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHCCC KILVVNDAFELRGLITVKDIQKKSDYPNAAKDAVTRLLVGAAVGVGGETEKRVETLATAG EEEEEECHHHHCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC VDVIIVDTAHGYSQGVLDRVAWIKRYFPQLQVIGGNIVTGDAALALMDVGADAVKVGVGP CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCEEEECCHHEEEECCCCCEEEECCCC GSICTTRMVAGVGVPQITAVQMVSDALQDRIPLIADGGIRYSGDIGKALAAGASTVMIGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCEEECCCHHHHHHCCCCEEEEEE LFAGTEEAPGDVELFQGRTYKSYRGMGSLAAMEKGSKDRYFQEASDVDKLVPEGIEGRVP EEECCCCCCCCEEEECCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC YRGSVSGIVHQLMGGLRATMGYVGCATIEEMRTKPQFVKITGAGQVESHVHDVQITKEPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCEEEEEECCCC NYRMR CCCCC >Mature Secondary Structure MLRILAEALTYDDVSLVPSHSTVLPKDVKLETRLTRNIRLKLPILSAAMDTVTEARLAIV CHHHHHHHHCCCCCEECCCCCCCCCCCCEEHEEECCCEEEEEHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTIEQQVAEVTKVKKYESGVIRDPITVDPETSIRDVLALTRAKNISG HHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCCCC VPVVDKGQLIGLVTHRDMRFERELDDPVRHIMTKKEALVTVKEGADSQEVLQLLHKHRIE CCEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHCCC KILVVNDAFELRGLITVKDIQKKSDYPNAAKDAVTRLLVGAAVGVGGETEKRVETLATAG EEEEEECHHHHCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC VDVIIVDTAHGYSQGVLDRVAWIKRYFPQLQVIGGNIVTGDAALALMDVGADAVKVGVGP CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCEEEECCHHEEEECCCCCEEEECCCC GSICTTRMVAGVGVPQITAVQMVSDALQDRIPLIADGGIRYSGDIGKALAAGASTVMIGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCEEECCCHHHHHHCCCCEEEEEE LFAGTEEAPGDVELFQGRTYKSYRGMGSLAAMEKGSKDRYFQEASDVDKLVPEGIEGRVP EEECCCCCCCCEEEECCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC YRGSVSGIVHQLMGGLRATMGYVGCATIEEMRTKPQFVKITGAGQVESHVHDVQITKEPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCEEEEEECCCC NYRMR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA