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The map label for this gene is ydhD [C]

Identifier: 182682020

GI number: 182682020

Start: 1656096

End: 1657022

Strand: Reverse

Name: ydhD [C]

Synonym: XfasM23_1496

Alternate gene names: 182682020

Gene position: 1657022-1656096 (Counterclockwise)

Preceding gene: 182682022

Following gene: 182682018

Centisome position: 65.35

GC content: 54.58

Gene sequence:

>927_bases
ATGTCTCTTGATTCTGCATTGCGTTCGCGCATCGAAACGTTGTTGCATTCCAACCGTGTTGTTTTGTTTATGAAGGGGCG
TCCGGGGATGCCGCAGTGCGGTTTTTCTGCTAAGGCGGCAGGCATTCTCCAGGCACTTGGTGTTGAGTACGCGCATGTCA
ATGTATTGGACGACCAAGAGATACGAGAGGGGATCAAACGCTATGGCGATTGGCCAACAATTCCGCAGTTGTACATTGAT
GGCGAGTTGATCGGTGGCAGTGACATCGTGTCGCAGATGTATGAGAACGGGGAGTTGAGCACTTTGCTTGGTGTGGCTGC
TCCGGACCTTACGCCGCCATCCATCACGATCACTCCAACTGCTGTGGAGATGCTCAAGGGTACATTAGCCAATGCACCCG
GGAGTACGTTGGCACTGTCAATCGATAGTCGTTTCCAACCTACTTTTGAGCTGGCGCCAATTAATACGCAGGCAATTGCT
GCAGAATATAACGGTTTACGGGTGCAGTTTGATCTTGCCAGTGCGCGTCGTGCTGAGGGCATCACGATTGATTGGGTTGA
TGATATCCGTGGCCAGGGGTTAGTGATTGACAATCCAAACGCGCCTCAGCCGATTCAGGAGTTATCGCCCGGTGATGCGG
CGGCTCAGGTTGATGCGGGTGTTCTGACGTTGGTGGATGTGCGCCCTGCTGATGAGCGTGCGGTTGCTTCGGTCGCTGTG
CCGTTCCGCACCATGGACGGCGGCGAACGTGCTGTTCTGGAGCAGCTTCCCAAAGGGACGCCGCTGGCATTCTTGTGTCA
TCACGGCGGGCGTAGTCTCCAGGCCGCCGAGCATTTCCGTAGTCTGGGGTTTACCTCTATCTACAATATCGGTGGTGGCA
TTGATGCTTGGTCCACCCAGGTTGATCCTGGCGTGCCGAAGTATTGA

Upstream 100 bases:

>100_bases
ATCACGGTGTAATGTGGTATTTCTTTTGTTGTCATGTCCGCATCATCGCATGCAGGCGTAAAATGGGCAGCTATTCCACG
TCCCATGATCGGTTTCCCAA

Downstream 100 bases:

>100_bases
ACCGATCCATGAGGGATGTCGGATGTCATGGTTCCTGGGTGACATTGGTATTCCCAGGGGGAGTGGGGTTGTTGGTGCTG
GAACGACGGTATAAGGCTCG

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSLDSALRSRIETLLHSNRVVLFMKGRPGMPQCGFSAKAAGILQALGVEYAHVNVLDDQEIREGIKRYGDWPTIPQLYID
GELIGGSDIVSQMYENGELSTLLGVAAPDLTPPSITITPTAVEMLKGTLANAPGSTLALSIDSRFQPTFELAPINTQAIA
AEYNGLRVQFDLASARRAEGITIDWVDDIRGQGLVIDNPNAPQPIQELSPGDAAAQVDAGVLTLVDVRPADERAVASVAV
PFRTMDGGERAVLEQLPKGTPLAFLCHHGGRSLQAAEHFRSLGFTSIYNIGGGIDAWSTQVDPGVPKY

Sequences:

>Translated_308_residues
MSLDSALRSRIETLLHSNRVVLFMKGRPGMPQCGFSAKAAGILQALGVEYAHVNVLDDQEIREGIKRYGDWPTIPQLYID
GELIGGSDIVSQMYENGELSTLLGVAAPDLTPPSITITPTAVEMLKGTLANAPGSTLALSIDSRFQPTFELAPINTQAIA
AEYNGLRVQFDLASARRAEGITIDWVDDIRGQGLVIDNPNAPQPIQELSPGDAAAQVDAGVLTLVDVRPADERAVASVAV
PFRTMDGGERAVLEQLPKGTPLAFLCHHGGRSLQAAEHFRSLGFTSIYNIGGGIDAWSTQVDPGVPKY
>Mature_307_residues
SLDSALRSRIETLLHSNRVVLFMKGRPGMPQCGFSAKAAGILQALGVEYAHVNVLDDQEIREGIKRYGDWPTIPQLYIDG
ELIGGSDIVSQMYENGELSTLLGVAAPDLTPPSITITPTAVEMLKGTLANAPGSTLALSIDSRFQPTFELAPINTQAIAA
EYNGLRVQFDLASARRAEGITIDWVDDIRGQGLVIDNPNAPQPIQELSPGDAAAQVDAGVLTLVDVRPADERAVASVAVP
FRTMDGGERAVLEQLPKGTPLAFLCHHGGRSLQAAEHFRSLGFTSIYNIGGGIDAWSTQVDPGVPKY

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=52.1739130434783, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI95113651, Length=97, Percent_Identity=48.4536082474227, Blast_Score=107, Evalue=9e-24,
Organism=Escherichia coli, GI1787943, Length=99, Percent_Identity=45.4545454545455, Blast_Score=107, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17556042, Length=97, Percent_Identity=45.360824742268, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71988159, Length=91, Percent_Identity=41.7582417582418, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71988153, Length=92, Percent_Identity=41.304347826087, Blast_Score=97, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6325198, Length=109, Percent_Identity=49.5412844036697, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6321022, Length=89, Percent_Identity=41.5730337078652, Blast_Score=93, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6320303, Length=89, Percent_Identity=41.5730337078652, Blast_Score=92, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24642023, Length=92, Percent_Identity=45.6521739130435, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=44.4444444444444, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 32900; Mature: 32768

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDSALRSRIETLLHSNRVVLFMKGRPGMPQCGFSAKAAGILQALGVEYAHVNVLDDQE
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHH
IREGIKRYGDWPTIPQLYIDGELIGGSDIVSQMYENGELSTLLGVAAPDLTPPSITITPT
HHHHHHHHCCCCCCCEEEECCEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECHH
AVEMLKGTLANAPGSTLALSIDSRFQPTFELAPINTQAIAAEYNGLRVQFDLASARRAEG
HHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCHHEEEEECCCEEEEEECCCCCCCCC
ITIDWVDDIRGQGLVIDNPNAPQPIQELSPGDAAAQVDAGVLTLVDVRPADERAVASVAV
CEEEEHHCCCCCEEEEECCCCCCHHHHCCCCCCHHHCCCCEEEEEECCCCCCHHHEEEEE
PFRTMDGGERAVLEQLPKGTPLAFLCHHGGRSLQAAEHFRSLGFTSIYNIGGGIDAWSTQ
CEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCC
VDPGVPKY
CCCCCCCC
>Mature Secondary Structure 
SLDSALRSRIETLLHSNRVVLFMKGRPGMPQCGFSAKAAGILQALGVEYAHVNVLDDQE
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHH
IREGIKRYGDWPTIPQLYIDGELIGGSDIVSQMYENGELSTLLGVAAPDLTPPSITITPT
HHHHHHHHCCCCCCCEEEECCEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECHH
AVEMLKGTLANAPGSTLALSIDSRFQPTFELAPINTQAIAAEYNGLRVQFDLASARRAEG
HHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCHHEEEEECCCEEEEEECCCCCCCCC
ITIDWVDDIRGQGLVIDNPNAPQPIQELSPGDAAAQVDAGVLTLVDVRPADERAVASVAV
CEEEEHHCCCCCEEEEECCCCCCHHHHCCCCCCHHHCCCCEEEEEECCCCCCHHHEEEEE
PFRTMDGGERAVLEQLPKGTPLAFLCHHGGRSLQAAEHFRSLGFTSIYNIGGGIDAWSTQ
CEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCC
VDPGVPKY
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]