Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

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The map label for this gene is fur [H]

Identifier: 182681984

GI number: 182681984

Start: 1612603

End: 1613043

Strand: Reverse

Name: fur [H]

Synonym: XfasM23_1459

Alternate gene names: 182681984

Gene position: 1613043-1612603 (Counterclockwise)

Preceding gene: 182681986

Following gene: 182681982

Centisome position: 63.61

GC content: 47.62

Gene sequence:

>441_bases
ATGCTAAATGGTCCATCAATTGAGAAGTCAATGGAATTAAATGATTTACGTAAAGTTGGTTTGAAGGTGACACATCCGCG
GATCCGTATCCTCGAACTGCTCGAACAGTCCAGTAGTGAACATCACCTTAGTGCTGAAGACATTTACCGGCAGTTGCTTG
AGCAGGGTAACGAAATTGGCTTGGCAACAGTGTATCGGGTGCTGACTCAGTTTGAGGCGGCAGGATTAGTGCTTAAGCAT
AATTTCGAGAGCGGGCAGGCGGTCTACGAGATCGACCGTGGCGGACATCACGATCATATGGTGGATGTCGATACCGGTAA
GATCATTGAGTTTCACAACGAGGAGATTGAGTTGTTGCAGCGCAGCATTGCTGCTGAACGCGGTTATGAGTTGGAAGAAC
ACTCGTTGGTCTTGTACGTACGTAAAAAACGCGGTCGTTGA

Upstream 100 bases:

>100_bases
AGGAGGAGATTGCGCATTGGAATTTTAGCAGTCAACAGGTAAATATTTGCACGATGATACACTCCTATGCGGTTGCCGTA
ACCGATTCACGAGGTCGCGG

Downstream 100 bases:

>100_bases
TGGTGAGTGCGTTTCCGTGCGTGTAACGGGAGAACAGAGTGGTGTGAGGGTAGGGGGAGCGGAGTTATTTTCTTGAATGT
ACAGTGCTTCATGGATGCCT

Product: ferric uptake regulator family protein

Products: NA

Alternate protein names: Ferric uptake regulator [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLNGPSIEKSMELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIGLATVYRVLTQFEAAGLVLKH
NFESGQAVYEIDRGGHHDHMVDVDTGKIIEFHNEEIELLQRSIAAERGYELEEHSLVLYVRKKRGR

Sequences:

>Translated_146_residues
MLNGPSIEKSMELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIGLATVYRVLTQFEAAGLVLKH
NFESGQAVYEIDRGGHHDHMVDVDTGKIIEFHNEEIELLQRSIAAERGYELEEHSLVLYVRKKRGR
>Mature_146_residues
MLNGPSIEKSMELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIGLATVYRVLTQFEAAGLVLKH
NFESGQAVYEIDRGGHHDHMVDVDTGKIIEFHNEEIELLQRSIAAERGYELEEHSLVLYVRKKRGR

Specific function: Fur acts as a repressor, employing Fe(2+) as a cofactor to bind the operator of the iron transport operon. Involved in exotoxin A regulation, siderophore regulation and manganese susceptibility [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

Organism=Escherichia coli, GI1786899, Length=124, Percent_Identity=56.4516129032258, Blast_Score=146, Evalue=5e-37,

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 16782; Mature: 16782

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNGPSIEKSMELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIG
CCCCCCCCHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
LATVYRVLTQFEAAGLVLKHNFESGQAVYEIDRGGHHDHMVDVDTGKIIEFHNEEIELLQ
HHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCEEECCCCCEEEECCHHHHHHH
RSIAAERGYELEEHSLVLYVRKKRGR
HHHHHHCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MLNGPSIEKSMELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIG
CCCCCCCCHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
LATVYRVLTQFEAAGLVLKHNFESGQAVYEIDRGGHHDHMVDVDTGKIIEFHNEEIELLQ
HHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCEEECCCCCEEEECCHHHHHHH
RSIAAERGYELEEHSLVLYVRKKRGR
HHHHHHCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478325; 9852033; 10984043 [H]