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The map label for this gene is yccY [C]

Identifier: 182681949

GI number: 182681949

Start: 1579495

End: 1579959

Strand: Direct

Name: yccY [C]

Synonym: XfasM23_1422

Alternate gene names: 182681949

Gene position: 1579495-1579959 (Clockwise)

Preceding gene: 182681948

Following gene: 182681951

Centisome position: 62.29

GC content: 55.7

Gene sequence:

>465_bases
ATGAGATTGTTGGTCGTTTGCCTGGGTAACATTTGTCGCTCCCCAATGGGCGAGGGAGCATTACGCAAGCACATCACCGC
AAGCGGTAAAAACGAGGAAATCGCAGTCGACTCCGCTGGCACCAGTCACTGGCATATAGGCCAGCCACCAGATGCCAGTG
CAGTCCATTGCGCACGCAGCCACGGTATTGACATTTCCACACTGCGCGCCCGTCAGGTACACCATGCGGATTTTGAGCAC
TTCGACTGGCTACTCTGCGCCGATGCGTCGAACCAATGCGACCTGCTCCGCTTAGCGCCCCCCGGGACAGCCCATAAGAT
CGTCCTGTGGTTACCTTGGGCAGGAATCACACAGGAACGCGAAATACCGGATCCATACCTTGGTAACGCGAAAGACTTCG
AACATGTGTGGCAGTTGATTGACACGGCTGCACAACGCAGCTTGGCACGACTCACACGTACTTAA

Upstream 100 bases:

>100_bases
CAGGGCATCGGATCGCGGTCAGGATCACTCCGGAACATTTCCCGCCCGGTATCGATACCCCAGAAGACTTAGCCAAAGCC
GAGAAGGCATTGGAGGATGT

Downstream 100 bases:

>100_bases
AACGCGACATCTCCATCCCAATAACCATCCCAATAAACCGATGTCCTGCACGCAAGGCGGCAACGCCGGTTGTGCCGCTG
CCTGCAAATGGATCAAGGAC

Product: protein tyrosine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRLLVVCLGNICRSPMGEGALRKHITASGKNEEIAVDSAGTSHWHIGQPPDASAVHCARSHGIDISTLRARQVHHADFEH
FDWLLCADASNQCDLLRLAPPGTAHKIVLWLPWAGITQEREIPDPYLGNAKDFEHVWQLIDTAAQRSLARLTRT

Sequences:

>Translated_154_residues
MRLLVVCLGNICRSPMGEGALRKHITASGKNEEIAVDSAGTSHWHIGQPPDASAVHCARSHGIDISTLRARQVHHADFEH
FDWLLCADASNQCDLLRLAPPGTAHKIVLWLPWAGITQEREIPDPYLGNAKDFEHVWQLIDTAAQRSLARLTRT
>Mature_154_residues
MRLLVVCLGNICRSPMGEGALRKHITASGKNEEIAVDSAGTSHWHIGQPPDASAVHCARSHGIDISTLRARQVHHADFEH
FDWLLCADASNQCDLLRLAPPGTAHKIVLWLPWAGITQEREIPDPYLGNAKDFEHVWQLIDTAAQRSLARLTRT

Specific function: Unknown

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

Organism=Homo sapiens, GI4757714, Length=137, Percent_Identity=44.5255474452555, Blast_Score=111, Evalue=2e-25,
Organism=Homo sapiens, GI6005988, Length=137, Percent_Identity=43.0656934306569, Blast_Score=111, Evalue=3e-25,
Organism=Homo sapiens, GI96304457, Length=77, Percent_Identity=48.0519480519481, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI87081812, Length=151, Percent_Identity=33.7748344370861, Blast_Score=78, Evalue=2e-16,
Organism=Escherichia coli, GI1788375, Length=144, Percent_Identity=31.25, Blast_Score=69, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6325330, Length=153, Percent_Identity=30.718954248366, Blast_Score=99, Evalue=3e-22,
Organism=Drosophila melanogaster, GI78706770, Length=155, Percent_Identity=36.1290322580645, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI78706772, Length=155, Percent_Identity=36.1290322580645, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI78706766, Length=138, Percent_Identity=32.6086956521739, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI78706768, Length=138, Percent_Identity=32.6086956521739, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI78706764, Length=125, Percent_Identity=32.8, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI78711846, Length=130, Percent_Identity=35.3846153846154, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 17070; Mature: 17070

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVVCLGNICRSPMGEGALRKHITASGKNEEIAVDSAGTSHWHIGQPPDASAVHCARS
CEEHEEEHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCHHHHHHHH
HGIDISTLRARQVHHADFEHFDWLLCADASNQCDLLRLAPPGTAHKIVLWLPWAGITQER
CCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCC
EIPDPYLGNAKDFEHVWQLIDTAAQRSLARLTRT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLLVVCLGNICRSPMGEGALRKHITASGKNEEIAVDSAGTSHWHIGQPPDASAVHCARS
CEEHEEEHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCHHHHHHHH
HGIDISTLRARQVHHADFEHFDWLLCADASNQCDLLRLAPPGTAHKIVLWLPWAGITQER
CCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCC
EIPDPYLGNAKDFEHVWQLIDTAAQRSLARLTRT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]