| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681925
Identifier: 182681925
GI number: 182681925
Start: 1551157
End: 1551867
Strand: Direct
Name: 182681925
Synonym: XfasM23_1393
Alternate gene names: NA
Gene position: 1551157-1551867 (Clockwise)
Preceding gene: 182681924
Following gene: 182681926
Centisome position: 61.17
GC content: 53.45
Gene sequence:
>711_bases ATGACCTCCCCAACTCCTACTCGCCAACCTCTACAACTTCCACAAGGCCAGCGCCTGCTATTACATTCGTGCTGTGCTCC CTGCTCAGGCGAACTCATGGAAGCCTTTGTGGAGTCCGGCATCGATTACACCATTTTCTTTTATAACCCCAACATTCACC CACTCAAAGAATACGAACTGCGCAAACAGGAAAATATCCGTTTTGCGGAGAAAAACGGGGTGCCATTCATTGACGCCGAT TACGACACTGATGCTTGGTTCGCCCGCGCCAAGGGCATGGAGAACGAACCAGAACGCGGCATCCGCTGCACCATGTGTTT TGATATGCGCTTTGAACGCACCGCGCTGTACGCACACGAACACGGCTTCCCTGTCATCACCAGTTCTTTAGGGATCTCCC GTTGGAAGAACATGGAGCAAATTAACGACTGCGGGCATCGTGCCGCTGCACCGTATCCCGGATTGGTCTACTGGGATTAC AACTGGCGCAAAAACGGCGGCAGCCAACGCATGATCGAAATCAGCAAGCGAGAGCACTTCTACCAACAGGAGTATTGCGG CTGCGTCTACTCACTGCGCGACACCAACCAACATCGCCGCACACAGGGCCGGGAACGCATCAAACTCGGCGTGCTGTACT ACGGCGACACCCCTGAATCTGCAAACACAAACAGTACATCAGGTGTCACCCCAACAGAGACAACGGATTAA
Upstream 100 bases:
>100_bases GGTGCATGCCGCGCAGCGGCTACGTGCCGAATAAGCACAGACCATCCGTATACAATCGCTGGGGCGTTCAACCGCCCCAG CTCGTACTGGAGCACCCTGT
Downstream 100 bases:
>100_bases ACTGCCTCACCTGTTATCTCAATGGAGCACTTCATGCACCCTGAAAACGTCGCATTGATCGTCGTCGACCTACAGCCTGA TTTCATGCCAGGCGGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTSPTPTRQPLQLPQGQRLLLHSCCAPCSGELMEAFVESGIDYTIFFYNPNIHPLKEYELRKQENIRFAEKNGVPFIDAD YDTDAWFARAKGMENEPERGIRCTMCFDMRFERTALYAHEHGFPVITSSLGISRWKNMEQINDCGHRAAAPYPGLVYWDY NWRKNGGSQRMIEISKREHFYQQEYCGCVYSLRDTNQHRRTQGRERIKLGVLYYGDTPESANTNSTSGVTPTETTD
Sequences:
>Translated_236_residues MTSPTPTRQPLQLPQGQRLLLHSCCAPCSGELMEAFVESGIDYTIFFYNPNIHPLKEYELRKQENIRFAEKNGVPFIDAD YDTDAWFARAKGMENEPERGIRCTMCFDMRFERTALYAHEHGFPVITSSLGISRWKNMEQINDCGHRAAAPYPGLVYWDY NWRKNGGSQRMIEISKREHFYQQEYCGCVYSLRDTNQHRRTQGRERIKLGVLYYGDTPESANTNSTSGVTPTETTD >Mature_235_residues TSPTPTRQPLQLPQGQRLLLHSCCAPCSGELMEAFVESGIDYTIFFYNPNIHPLKEYELRKQENIRFAEKNGVPFIDADY DTDAWFARAKGMENEPERGIRCTMCFDMRFERTALYAHEHGFPVITSSLGISRWKNMEQINDCGHRAAAPYPGLVYWDYN WRKNGGSQRMIEISKREHFYQQEYCGCVYSLRDTNQHRRTQGRERIKLGVLYYGDTPESANTNSTSGVTPTETTD
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 27291; Mature: 27160
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPTPTRQPLQLPQGQRLLLHSCCAPCSGELMEAFVESGIDYTIFFYNPNIHPLKEYEL CCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH RKQENIRFAEKNGVPFIDADYDTDAWFARAKGMENEPERGIRCTMCFDMRFERTALYAHE HHHCCCEEECCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCHHEEEEEC HGFPVITSSLGISRWKNMEQINDCGHRAAAPYPGLVYWDYNWRKNGGSQRMIEISKREHF CCCCEEECCCCHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHH YQQEYCGCVYSLRDTNQHRRTQGRERIKLGVLYYGDTPESANTNSTSGVTPTETTD HHHHHHCEEEEHHCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSPTPTRQPLQLPQGQRLLLHSCCAPCSGELMEAFVESGIDYTIFFYNPNIHPLKEYEL CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH RKQENIRFAEKNGVPFIDADYDTDAWFARAKGMENEPERGIRCTMCFDMRFERTALYAHE HHHCCCEEECCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCHHEEEEEC HGFPVITSSLGISRWKNMEQINDCGHRAAAPYPGLVYWDYNWRKNGGSQRMIEISKREHF CCCCEEECCCCHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHH YQQEYCGCVYSLRDTNQHRRTQGRERIKLGVLYYGDTPESANTNSTSGVTPTETTD HHHHHHCEEEEHHCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]