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The map label for this gene is glpD

Identifier: 182681919

GI number: 182681919

Start: 1542013

End: 1543536

Strand: Direct

Name: glpD

Synonym: XfasM23_1387

Alternate gene names: 182681919

Gene position: 1542013-1543536 (Clockwise)

Preceding gene: 182681916

Following gene: 182681920

Centisome position: 60.81

GC content: 55.77

Gene sequence:

>1524_bases
ATGACCATTCACAATTTCGACCTACTGGTGGTCGGTGGCGGTATCAACGGCACCGGCATTGCCCGTGATGCCGCCGGACG
TCACCTCTCAGTGTGTCTGTGCGAACAACACGACCTGGCCTCCCACACCTCCAGCGCCAGCACCAAACTGATTCACGGCG
GGCTGCGCTACTTGGAATATTACGAATTTGCGTTAGTCAGCAAAGCATTGGCCGAACGCGAAATCTTGCTACGCCAAGCA
CCGCACATTGTCAGGCCACTGCATTTTATCCTCCCGCACCAACCCCATCTGCGCCCCACCTGGATAATCCGCGCGGGCTT
GCTGCTGTACGACCACCTTGGCTTTAGTCGACGCACCCTGCCTCGCTCACGTCGCTTGAACTTGGCCCAACATCCCGCTG
GGCAACCACTCAAACAGGAGCTGCACACCGGCTTCATGTATTGCGACGCCCAGGTCCAAGACGCACGGCTGGTCGTGCTG
AATGCAATGGATGCAGCACAACGTGGCGCACGTATCCTCACCCGCACCCGCTGCGTGAGAACGCGCCGTGACGGCGCACA
TTGGTTGACTGAACTGGAAGACGCTCAAGGAAGACAGCAACAAATTCGTACACGGGCCATCGTCAATGCCGCCGGCCCCT
GGGCCGTCACGTTTCTGGATCACATCGCTCAACAGCCACATCAGCACACACTGCGTCTGGTGAAAGGCAGCCACATTGTA
GTACCCCGTCTGTTTGAACATGAGCATGCCTATATCTTCCAACAACCAGACAGACGCATCGTCTTTGCCATTCCTTACGA
ACAACATTTCACACTGATTGGCACTACCGACGTCGACTACGTAGCTGATCCGGCAAATCCACACATTGACGCTGCCGAAA
CCATGTACCTGTGCAATGCAGTCAATTCGTATTTCAGACAACAAATCACACCGGAAGACGTCCTCTGGAGCTACAGCGGA
GTCCGTCCCCTACTGAACGATGGACACAACAATGCATCGAAAGTCACTCGTGATTACCAATTAGAAATACTTGGAAACAG
CGCACCATTACTCAACGTGTTTGGTGGCAAACTCACCACCTATCGCAAGCTTTCCGAAGAAGCAGTGAACCAGCTATGCG
TAGCATTGGACCACCCCTACCGTGCCTGGACTGCCAATGGGCCACCCCTGCCTGGCGGCGAACACCACGACATCGCAGCG
CTACAAAACACACTGCGCCAACACCGCCCATGGTTACCTACTGCCACTGCGCAACGCCTGATACACAACTACGGCACCTA
TGCCGAAACGCTGCTCGGCAATGCCACCAACCTACACACCCTGGGAATTCACTTTGGCGCCGACCTGTATCAAGCCGAAG
TAGACTACCTGCGCACCCACGAATGGGCATGCAGTGCCGAAGACATCCTCTGGCGCCGCAGCAAACTCGGCCTGCATTTA
GATGCGCATGGCACACAGCGCCTTGAAGACTATCTACGCTCCTGCTCACGCATCCCTGATCACGCGGACACAACAACACA
ATGA

Upstream 100 bases:

>100_bases
TCAAAACAACACGCATTCCTCAAGGTCAATCCGAGATATTGTCAGCATCACATGAAGAACTCTTTTAAACCGAGTTCATA
TCGCTGACTGAAGTAGATCC

Downstream 100 bases:

>100_bases
TCCTGCCAGCTCCAAAACATCAATTGCACTGCCCCTGAAGCTAAGACGTTTCAGCCACCACGGAATGGAGATAAATGCAC
TCAATCCCCCTGCCCCCTGC

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTIHNFDLLVVGGGINGTGIARDAAGRHLSVCLCEQHDLASHTSSASTKLIHGGLRYLEYYEFALVSKALAEREILLRQA
PHIVRPLHFILPHQPHLRPTWIIRAGLLLYDHLGFSRRTLPRSRRLNLAQHPAGQPLKQELHTGFMYCDAQVQDARLVVL
NAMDAAQRGARILTRTRCVRTRRDGAHWLTELEDAQGRQQQIRTRAIVNAAGPWAVTFLDHIAQQPHQHTLRLVKGSHIV
VPRLFEHEHAYIFQQPDRRIVFAIPYEQHFTLIGTTDVDYVADPANPHIDAAETMYLCNAVNSYFRQQITPEDVLWSYSG
VRPLLNDGHNNASKVTRDYQLEILGNSAPLLNVFGGKLTTYRKLSEEAVNQLCVALDHPYRAWTANGPPLPGGEHHDIAA
LQNTLRQHRPWLPTATAQRLIHNYGTYAETLLGNATNLHTLGIHFGADLYQAEVDYLRTHEWACSAEDILWRRSKLGLHL
DAHGTQRLEDYLRSCSRIPDHADTTTQ

Sequences:

>Translated_507_residues
MTIHNFDLLVVGGGINGTGIARDAAGRHLSVCLCEQHDLASHTSSASTKLIHGGLRYLEYYEFALVSKALAEREILLRQA
PHIVRPLHFILPHQPHLRPTWIIRAGLLLYDHLGFSRRTLPRSRRLNLAQHPAGQPLKQELHTGFMYCDAQVQDARLVVL
NAMDAAQRGARILTRTRCVRTRRDGAHWLTELEDAQGRQQQIRTRAIVNAAGPWAVTFLDHIAQQPHQHTLRLVKGSHIV
VPRLFEHEHAYIFQQPDRRIVFAIPYEQHFTLIGTTDVDYVADPANPHIDAAETMYLCNAVNSYFRQQITPEDVLWSYSG
VRPLLNDGHNNASKVTRDYQLEILGNSAPLLNVFGGKLTTYRKLSEEAVNQLCVALDHPYRAWTANGPPLPGGEHHDIAA
LQNTLRQHRPWLPTATAQRLIHNYGTYAETLLGNATNLHTLGIHFGADLYQAEVDYLRTHEWACSAEDILWRRSKLGLHL
DAHGTQRLEDYLRSCSRIPDHADTTTQ
>Mature_506_residues
TIHNFDLLVVGGGINGTGIARDAAGRHLSVCLCEQHDLASHTSSASTKLIHGGLRYLEYYEFALVSKALAEREILLRQAP
HIVRPLHFILPHQPHLRPTWIIRAGLLLYDHLGFSRRTLPRSRRLNLAQHPAGQPLKQELHTGFMYCDAQVQDARLVVLN
AMDAAQRGARILTRTRCVRTRRDGAHWLTELEDAQGRQQQIRTRAIVNAAGPWAVTFLDHIAQQPHQHTLRLVKGSHIVV
PRLFEHEHAYIFQQPDRRIVFAIPYEQHFTLIGTTDVDYVADPANPHIDAAETMYLCNAVNSYFRQQITPEDVLWSYSGV
RPLLNDGHNNASKVTRDYQLEILGNSAPLLNVFGGKLTTYRKLSEEAVNQLCVALDHPYRAWTANGPPLPGGEHHDIAAL
QNTLRQHRPWLPTATAQRLIHNYGTYAETLLGNATNLHTLGIHFGADLYQAEVDYLRTHEWACSAEDILWRRSKLGLHLD
AHGTQRLEDYLRSCSRIPDHADTTTQ

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=521, Percent_Identity=29.9424184261036, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI285002231, Length=521, Percent_Identity=29.9424184261036, Blast_Score=171, Evalue=1e-42,
Organism=Escherichia coli, GI2367226, Length=471, Percent_Identity=48.1953290870488, Blast_Score=431, Evalue=1e-122,
Organism=Escherichia coli, GI1788574, Length=388, Percent_Identity=28.3505154639175, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI115534726, Length=525, Percent_Identity=28.7619047619048, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17509253, Length=516, Percent_Identity=30.0387596899225, Blast_Score=152, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6322036, Length=482, Percent_Identity=30.0829875518672, Blast_Score=143, Evalue=6e-35,
Organism=Drosophila melanogaster, GI161077125, Length=516, Percent_Identity=28.6821705426357, Blast_Score=150, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24653942, Length=516, Percent_Identity=28.6821705426357, Blast_Score=150, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24653944, Length=516, Percent_Identity=28.6821705426357, Blast_Score=150, Evalue=3e-36,
Organism=Drosophila melanogaster, GI20130025, Length=516, Percent_Identity=28.6821705426357, Blast_Score=150, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24586295, Length=508, Percent_Identity=26.9685039370079, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19921278, Length=516, Percent_Identity=26.3565891472868, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 57365; Mature: 57234

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHNFDLLVVGGGINGTGIARDAAGRHLSVCLCEQHDLASHTSSASTKLIHGGLRYLEY
CEEEEEEEEEEECCCCCCCCCHHCCCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHH
YEFALVSKALAEREILLRQAPHIVRPLHFILPHQPHLRPTWIIRAGLLLYDHLGFSRRTL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHCC
PRSRRLNLAQHPAGQPLKQELHTGFMYCDAQVQDARLVVLNAMDAAQRGARILTRTRCVR
CHHHCCCCCCCCCCCHHHHHHHCCEEEEECEECCCEEEEEECHHHHHHHHHHHHHHHHHH
TRRDGAHWLTELEDAQGRQQQIRTRAIVNAAGPWAVTFLDHIAQQPHQHTLRLVKGSHIV
HHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEE
VPRLFEHEHAYIFQQPDRRIVFAIPYEQHFTLIGTTDVDYVADPANPHIDAAETMYLCNA
ECHHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHH
VNSYFRQQITPEDVLWSYSGVRPLLNDGHNNASKVTRDYQLEILGNSAPLLNVFGGKLTT
HHHHHHHCCCHHHHHHCCCCCCHHHHCCCCCHHHCCCEEEEEEECCCCCEEECCCCCHHH
YRKLSEEAVNQLCVALDHPYRAWTANGPPLPGGEHHDIAALQNTLRQHRPWLPTATAQRL
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
IHNYGTYAETLLGNATNLHTLGIHFGADLYQAEVDYLRTHEWACSAEDILWRRSKLGLHL
HHHCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
DAHGTQRLEDYLRSCSRIPDHADTTTQ
ECCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TIHNFDLLVVGGGINGTGIARDAAGRHLSVCLCEQHDLASHTSSASTKLIHGGLRYLEY
EEEEEEEEEEECCCCCCCCCHHCCCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHH
YEFALVSKALAEREILLRQAPHIVRPLHFILPHQPHLRPTWIIRAGLLLYDHLGFSRRTL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHCC
PRSRRLNLAQHPAGQPLKQELHTGFMYCDAQVQDARLVVLNAMDAAQRGARILTRTRCVR
CHHHCCCCCCCCCCCHHHHHHHCCEEEEECEECCCEEEEEECHHHHHHHHHHHHHHHHHH
TRRDGAHWLTELEDAQGRQQQIRTRAIVNAAGPWAVTFLDHIAQQPHQHTLRLVKGSHIV
HHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEE
VPRLFEHEHAYIFQQPDRRIVFAIPYEQHFTLIGTTDVDYVADPANPHIDAAETMYLCNA
ECHHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHH
VNSYFRQQITPEDVLWSYSGVRPLLNDGHNNASKVTRDYQLEILGNSAPLLNVFGGKLTT
HHHHHHHCCCHHHHHHCCCCCCHHHHCCCCCHHHCCCEEEEEEECCCCCEEECCCCCHHH
YRKLSEEAVNQLCVALDHPYRAWTANGPPLPGGEHHDIAALQNTLRQHRPWLPTATAQRL
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
IHNYGTYAETLLGNATNLHTLGIHFGADLYQAEVDYLRTHEWACSAEDILWRRSKLGLHL
HHHCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
DAHGTQRLEDYLRSCSRIPDHADTTTQ
ECCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8157588; 10984043 [H]