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The map label for this gene is recO

Identifier: 182681909

GI number: 182681909

Start: 1524219

End: 1524950

Strand: Direct

Name: recO

Synonym: XfasM23_1377

Alternate gene names: 182681909

Gene position: 1524219-1524950 (Clockwise)

Preceding gene: 182681908

Following gene: 182681913

Centisome position: 60.11

GC content: 53.42

Gene sequence:

>732_bases
ATGCTGATCGAACATGAAGTCGCCTTCGTCCTGCATGTACGTCCCTGGCGCGAAACCAGTTTACTGGTCGAAGTACTGAC
CCAGGCATATGGGCGTCTTGGCTTGATCGCACGTGGTGTACAAGGACTGAAAAAACAAACATTACGTGCAGCGTTGCAAC
CGCTACAGTGGATCCGATTCAGTGCGATACAACGTGGCGAACTTGGCCAATTACGCCAAGCCGAAGCACTGGACACTGCC
CCACGCCTCAAAGGCGAAACCATGTTAGCCAGTTTCTACATTAACGAATTGCTATTGCGCTTAGTGCCACGCCACGCCCC
AGTCAACGAACTGTATCTTGCCTATTCACAGACACGGGAACGCCTACGCACCAATGATTCCTTAGCCTGGTCACTTCGCC
TTTTTGAACTCGACATACTCGAAACACTAGGCGTTGGCTTCAACCTAGAATGCGATGCAAACGGTACACCACTTGACCCC
GCCGCCCGCTATGTTCTTGATCCATTAGAAGGGCCACGCCTTCTACTCAGCGAACACAACAACGCTGAGCGACGCGACAC
TGCCACCGGACACGTACTCCTGGCATTAGCGCACAAGCAAATACCAAATACCAATGATTTGGCTGGCCTACGCCGCAGCA
TGCGTGCAGTCCTGTTACACCACCTGGGCGGCCGCGGCCTGAAGTCGTGGGAAATGATCGCTGCATTCAGACACCAGGAC
ACATCACCGTAA

Upstream 100 bases:

>100_bases
ATGCCTGCATACGCGATGACAGTGCTTACAATCGCATCTAAACAAAGCTGCAAGATCCCAATCACTGCCCGGGCATCCCC
TTTCTATTCCTGATCTTTCC

Downstream 100 bases:

>100_bases
ATTTCCAATCACCGCAACGCTGCGCGGATCTCCCCGCACAACCACAGCGCAGCAGCGATGCACTCACACAACCACCCTGC
GGGACACGCCTGCATGACCA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRFSAIQRGELGQLRQAEALDTA
PRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRERLRTNDSLAWSLRLFELDILETLGVGFNLECDANGTPLDP
AARYVLDPLEGPRLLLSEHNNAERRDTATGHVLLALAHKQIPNTNDLAGLRRSMRAVLLHHLGGRGLKSWEMIAAFRHQD
TSP

Sequences:

>Translated_243_residues
MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRFSAIQRGELGQLRQAEALDTA
PRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRERLRTNDSLAWSLRLFELDILETLGVGFNLECDANGTPLDP
AARYVLDPLEGPRLLLSEHNNAERRDTATGHVLLALAHKQIPNTNDLAGLRRSMRAVLLHHLGGRGLKSWEMIAAFRHQD
TSP
>Mature_243_residues
MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRFSAIQRGELGQLRQAEALDTA
PRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRERLRTNDSLAWSLRLFELDILETLGVGFNLECDANGTPLDP
AARYVLDPLEGPRLLLSEHNNAERRDTATGHVLLALAHKQIPNTNDLAGLRRSMRAVLLHHLGGRGLKSWEMIAAFRHQD
TSP

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=236, Percent_Identity=36.4406779661017, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_XYLF2 (B2I606)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001830069.1
- ProteinModelPortal:   B2I606
- GeneID:   6202391
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_1377
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- HAMAP:   MF_00201
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27440; Mature: 27440

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRF
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIQRGELGQLRQAEALDTAPRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRE
HHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RLRTNDSLAWSLRLFELDILETLGVGFNLECDANGTPLDPAARYVLDPLEGPRLLLSEHN
HHHCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCC
NAERRDTATGHVLLALAHKQIPNTNDLAGLRRSMRAVLLHHLGGRGLKSWEMIAAFRHQD
CCHHHHCCCHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
TSP
CCC
>Mature Secondary Structure
MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRF
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIQRGELGQLRQAEALDTAPRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRE
HHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RLRTNDSLAWSLRLFELDILETLGVGFNLECDANGTPLDPAARYVLDPLEGPRLLLSEHN
HHHCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCC
NAERRDTATGHVLLALAHKQIPNTNDLAGLRRSMRAVLLHHLGGRGLKSWEMIAAFRHQD
CCHHHHCCCHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
TSP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA