Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681906
Identifier: 182681906
GI number: 182681906
Start: 1522073
End: 1522450
Strand: Direct
Name: 182681906
Synonym: XfasM23_1374
Alternate gene names: NA
Gene position: 1522073-1522450 (Clockwise)
Preceding gene: 182681905
Following gene: 182681907
Centisome position: 60.03
GC content: 40.74
Gene sequence:
>378_bases GTGAAACGCACGCAATATGGAATCACACTGAGATCCACCTTAATTTTTACGATCATCATATTTTTTACAGTACATTTCGC TATCCATGCCTTTCTGGTGTACCAGAAATACTACTCCCTCCAGACTGCTATGAAGAGCTTGAAAAAAGAGCTTGGCAACA GCGATCTAGATCCATCCACGATCGAGGAATTGTTCCTAAAACGCATCAATATTGACTCTTTTGACAATGTGAAAAAAGAA AACATCAAGTTTGAAAAAATCAGAGATGGCTGGAAAATGAAGGTCAACTTTGAAATCCTCCGCAAGCGGATTGGGAATAT GGACCTGGTCGGCACATTCGATAGCGAGCAGGACTTGACATCACGTGATATCAAGTAA
Upstream 100 bases:
>100_bases TCAACTGCGAAAATTGGCTCTGCAAGGGAAGCTTTGATCCATCAAGAATCGGAACCGTCATTCGTTGAATGAAAGATTGG TTATTACCAAGGAAAATCTA
Downstream 100 bases:
>100_bases GGCCAGCGATTACCAACAGCGGATCGGCTATGTGTTTACCGATCCATCTCTGCTGCTGCAAGCACTGCGTCACCGTAGTG CCGGCACCCCGCACAATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MKRTQYGITLRSTLIFTIIIFFTVHFAIHAFLVYQKYYSLQTAMKSLKKELGNSDLDPSTIEELFLKRINIDSFDNVKKE NIKFEKIRDGWKMKVNFEILRKRIGNMDLVGTFDSEQDLTSRDIK
Sequences:
>Translated_125_residues MKRTQYGITLRSTLIFTIIIFFTVHFAIHAFLVYQKYYSLQTAMKSLKKELGNSDLDPSTIEELFLKRINIDSFDNVKKE NIKFEKIRDGWKMKVNFEILRKRIGNMDLVGTFDSEQDLTSRDIK >Mature_125_residues MKRTQYGITLRSTLIFTIIIFFTVHFAIHAFLVYQKYYSLQTAMKSLKKELGNSDLDPSTIEELFLKRINIDSFDNVKKE NIKFEKIRDGWKMKVNFEILRKRIGNMDLVGTFDSEQDLTSRDIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14792; Mature: 14792
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTQYGITLRSTLIFTIIIFFTVHFAIHAFLVYQKYYSLQTAMKSLKKELGNSDLDPST CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IEELFLKRINIDSFDNVKKENIKFEKIRDGWKMKVNFEILRKRIGNMDLVGTFDSEQDLT HHHHHHHHCCCCCCCCCHHHCCHHHHHCCCCEEEEHHHHHHHHHCCCCEEECCCCCCCCC SRDIK CCCCC >Mature Secondary Structure MKRTQYGITLRSTLIFTIIIFFTVHFAIHAFLVYQKYYSLQTAMKSLKKELGNSDLDPST CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IEELFLKRINIDSFDNVKKENIKFEKIRDGWKMKVNFEILRKRIGNMDLVGTFDSEQDLT HHHHHHHHCCCCCCCCCHHHCCHHHHHCCCCEEEEHHHHHHHHHCCCCEEECCCCCCCCC SRDIK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA