Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is 182681902

Identifier: 182681902

GI number: 182681902

Start: 1516780

End: 1517505

Strand: Direct

Name: 182681902

Synonym: XfasM23_1370

Alternate gene names: NA

Gene position: 1516780-1517505 (Clockwise)

Preceding gene: 182681901

Following gene: 182681903

Centisome position: 59.82

GC content: 53.03

Gene sequence:

>726_bases
ATGAGCAACCATCTGTCCGAAACTGCTGACAAGTTCGAACTGCACACCCGACTGCAATTGTCCCAACTGATTGATAGTGA
ACTACCGATGGACGAAGCACGCTTTCTTCTACGTCGGTTGCAACACAATGAAGAATTAGCCAACTGCCAGGAACGTTGGC
AACTGTATGGTGACGTGCTGCGTGGCGTTGCACTGGCTCCCGCCCCGACAGACTTTACGCTACGGGTACAAGCTGCAGTG
GCGGCGGAAGCAACACCTGTACGCACTAAACACCGCTGGCGCGGTGGGACCGCGTTAATCGCCTCCGTTGCCGCAATCAT
CTTACTAACACTACACGGGTGGCCACCGATGGCACCGCCGTTAACAGAAACAGAAATGGTATTTGCAACCACCGCACAAC
TACTTAAGCCTCCTGTATCGCCAAAGATTGCTGCAATCTCCGAGTTGCAACACGGAGACGTTGGCATAACACAACGGGGC
AAAACGACACACAACCAACAGGCTGCACCAGAACATACACTCGCTACGATTCCGGTAACACAAGACCCAGCTCGTCTGAA
CCTATTCACACATTACGACACGATACAAACCAAACCCTGGCCGCGTGCTGTTCTCTCTGCTCAGGCACCGTTTAACGCAA
ACCTGCCGGACACCGCTGTACGTCATGCGTTCTATCCATTCGAACCACCACTCCCAGAATCGCAACCTATGTCCTCACAG
GAGTAA

Upstream 100 bases:

>100_bases
GAACCGTACGTTCACGTATTTTCCGGGCGCGCGAAGCGATAGACATAGAATTACGACCTTTTCTAGAGATCAACAACATT
ACCCGCAAACGATATCGTGT

Downstream 100 bases:

>100_bases
GACCACCTCCTCACGGACTTCACGATGTCCCTTACCACTCACCGGTGTCGTTACCCCGGTTTGACTCACTTTGTTTCGCA
ATCAGGAGATTGATCTGATG

Product: anti sigma-E protein RseA

Products: NA

Alternate protein names: Negative Regulator Of Sigma E Activity; Anti-Sigma Factor RseA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSNHLSETADKFELHTRLQLSQLIDSELPMDEARFLLRRLQHNEELANCQERWQLYGDVLRGVALAPAPTDFTLRVQAAV
AAEATPVRTKHRWRGGTALIASVAAIILLTLHGWPPMAPPLTETEMVFATTAQLLKPPVSPKIAAISELQHGDVGITQRG
KTTHNQQAAPEHTLATIPVTQDPARLNLFTHYDTIQTKPWPRAVLSAQAPFNANLPDTAVRHAFYPFEPPLPESQPMSSQ
E

Sequences:

>Translated_241_residues
MSNHLSETADKFELHTRLQLSQLIDSELPMDEARFLLRRLQHNEELANCQERWQLYGDVLRGVALAPAPTDFTLRVQAAV
AAEATPVRTKHRWRGGTALIASVAAIILLTLHGWPPMAPPLTETEMVFATTAQLLKPPVSPKIAAISELQHGDVGITQRG
KTTHNQQAAPEHTLATIPVTQDPARLNLFTHYDTIQTKPWPRAVLSAQAPFNANLPDTAVRHAFYPFEPPLPESQPMSSQ
E
>Mature_240_residues
SNHLSETADKFELHTRLQLSQLIDSELPMDEARFLLRRLQHNEELANCQERWQLYGDVLRGVALAPAPTDFTLRVQAAVA
AEATPVRTKHRWRGGTALIASVAAIILLTLHGWPPMAPPLTETEMVFATTAQLLKPPVSPKIAAISELQHGDVGITQRGK
TTHNQQAAPEHTLATIPVTQDPARLNLFTHYDTIQTKPWPRAVLSAQAPFNANLPDTAVRHAFYPFEPPLPESQPMSSQE

Specific function: Unknown

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26719; Mature: 26588

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNHLSETADKFELHTRLQLSQLIDSELPMDEARFLLRRLQHNEELANCQERWQLYGDVL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RGVALAPAPTDFTLRVQAAVAAEATPVRTKHRWRGGTALIASVAAIILLTLHGWPPMAPP
HHCCCCCCCCCEEEEEEEHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
LTETEMVFATTAQLLKPPVSPKIAAISELQHGDVGITQRGKTTHNQQAAPEHTLATIPVT
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
QDPARLNLFTHYDTIQTKPWPRAVLSAQAPFNANLPDTAVRHAFYPFEPPLPESQPMSSQ
CCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
E
C
>Mature Secondary Structure 
SNHLSETADKFELHTRLQLSQLIDSELPMDEARFLLRRLQHNEELANCQERWQLYGDVL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RGVALAPAPTDFTLRVQAAVAAEATPVRTKHRWRGGTALIASVAAIILLTLHGWPPMAPP
HHCCCCCCCCCEEEEEEEHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
LTETEMVFATTAQLLKPPVSPKIAAISELQHGDVGITQRGKTTHNQQAAPEHTLATIPVT
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
QDPARLNLFTHYDTIQTKPWPRAVLSAQAPFNANLPDTAVRHAFYPFEPPLPESQPMSSQ
CCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA