| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is mtnC
Identifier: 182681877
GI number: 182681877
Start: 1483965
End: 1484663
Strand: Direct
Name: mtnC
Synonym: XfasM23_1345
Alternate gene names: 182681877
Gene position: 1483965-1484663 (Clockwise)
Preceding gene: 182681876
Following gene: 182681900
Centisome position: 58.52
GC content: 54.08
Gene sequence:
>699_bases ATGAGCATGCCTCAAGCAATTCTCACGGATATTGAAGGAACCACAAGCAGTCTTTCTTTCGTCAAAGAAGTGCTGTTTCC TTATGCACGCCGCGCCCTCCCCGACTTTGTCCGGGAACACCGTGAACACCCGGACGTGATGCCTTGGTTAGATCAAGTCG CCAACGAAACCGGCACAGCGTTCTCTGAAGAAGCTCTTGTAGCCACCTTGCAAACGTGGATCGACACGGATAGTAAGCAC ACCGCACTCAAAGCATTGCAAGGCATGATCTGGACATCCGGCTACCAGAACGGCGATTTCACCGCCCACCTCTACCCGGA TGCAGTCCAACGGCTGCGCGCCTGGCATGCGGCCAACGTGCCGCTGTACGTGTACTCATCCGGCTCGGTACCGGCACAGC AACTGTTCTTCCGCCACAGTCATGCAGGCGATCTGAGCGGACTGTTCTCAGGTTGGTTCGATACCCAAATCGGTGGCAAG CGTGAGTCCACCAGCTATCAACGCATTGCGCAACACATTGGGATTGCGCCCGCCGGGATCGTCTTTCTATCGGATGTGAT CGAAGAATTAAACGCCGCAGCACAAATCGGATTGAACACGGTATTGATTGATCGGCGTGACGATTATCCAACGCCACGTC ATCTTAAAGACACCGACCGCCATCTGCATTTGGATAGCTTTGCCCAACTGCCCTTTTAA
Upstream 100 bases:
>100_bases TTACCGAACCGGATGGCTGGGTTGGCCATTTCACCGGCACTGACATTGCACAACGCTTCCCCCGCTATATCCCCGAGGGC TGCCAAAGCGCGCACTGACA
Downstream 100 bases:
>100_bases ATCGGCGCGTTATTACCGTCATCCCGGCACCTCAATCCGCAACGACCGCCCAGCAGAACAACAATACCGCTGGCCCGTTG CATCCTGATAACGCGCTCAA
Product: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
Products: NA
Alternate protein names: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSMPQAILTDIEGTTSSLSFVKEVLFPYARRALPDFVREHREHPDVMPWLDQVANETGTAFSEEALVATLQTWIDTDSKH TALKALQGMIWTSGYQNGDFTAHLYPDAVQRLRAWHAANVPLYVYSSGSVPAQQLFFRHSHAGDLSGLFSGWFDTQIGGK RESTSYQRIAQHIGIAPAGIVFLSDVIEELNAAAQIGLNTVLIDRRDDYPTPRHLKDTDRHLHLDSFAQLPF
Sequences:
>Translated_232_residues MSMPQAILTDIEGTTSSLSFVKEVLFPYARRALPDFVREHREHPDVMPWLDQVANETGTAFSEEALVATLQTWIDTDSKH TALKALQGMIWTSGYQNGDFTAHLYPDAVQRLRAWHAANVPLYVYSSGSVPAQQLFFRHSHAGDLSGLFSGWFDTQIGGK RESTSYQRIAQHIGIAPAGIVFLSDVIEELNAAAQIGLNTVLIDRRDDYPTPRHLKDTDRHLHLDSFAQLPF >Mature_231_residues SMPQAILTDIEGTTSSLSFVKEVLFPYARRALPDFVREHREHPDVMPWLDQVANETGTAFSEEALVATLQTWIDTDSKHT ALKALQGMIWTSGYQNGDFTAHLYPDAVQRLRAWHAANVPLYVYSSGSVPAQQLFFRHSHAGDLSGLFSGWFDTQIGGKR ESTSYQRIAQHIGIAPAGIVFLSDVIEELNAAAQIGLNTVLIDRRDDYPTPRHLKDTDRHLHLDSFAQLPF
Specific function: Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone
COG id: COG4229
COG function: function code C; Predicted enolase-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. MasA/mtnC family
Homologues:
Organism=Homo sapiens, GI10864017, Length=247, Percent_Identity=34.8178137651822, Blast_Score=141, Evalue=4e-34, Organism=Caenorhabditis elegans, GI115533232, Length=217, Percent_Identity=41.9354838709677, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320797, Length=214, Percent_Identity=35.5140186915888, Blast_Score=120, Evalue=3e-28, Organism=Drosophila melanogaster, GI281360080, Length=213, Percent_Identity=40.3755868544601, Blast_Score=156, Evalue=1e-38, Organism=Drosophila melanogaster, GI24644163, Length=213, Percent_Identity=40.3755868544601, Blast_Score=156, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTNC_XYLF2 (B2I5X4)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830037.1 - ProteinModelPortal: B2I5X4 - SMR: B2I5X4 - GeneID: 6202210 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1345 - HOGENOM: HBG294242 - OMA: TTDLNFI - ProtClustDB: CLSK866737 - HAMAP: MF_01681 - InterPro: IPR005834 - InterPro: IPR010041 - InterPro: IPR023214 - InterPro: IPR006439 - Gene3D: G3DSA:3.40.50.1000 - PANTHER: PTHR20371 - TIGRFAMs: TIGR01691 - TIGRFAMs: TIGR01549
Pfam domain/function: PF00702 Hydrolase; SSF56784 SSF56784
EC number: =3.1.3.77
Molecular weight: Translated: 25992; Mature: 25861
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPQAILTDIEGTTSSLSFVKEVLFPYARRALPDFVREHREHPDVMPWLDQVANETGTA CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC FSEEALVATLQTWIDTDSKHTALKALQGMIWTSGYQNGDFTAHLYPDAVQRLRAWHAANV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCC PLYVYSSGSVPAQQLFFRHSHAGDLSGLFSGWFDTQIGGKRESTSYQRIAQHIGIAPAGI CEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHH VFLSDVIEELNAAAQIGLNTVLIDRRDDYPTPRHLKDTDRHLHLDSFAQLPF HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEECHHHHHCCCC >Mature Secondary Structure SMPQAILTDIEGTTSSLSFVKEVLFPYARRALPDFVREHREHPDVMPWLDQVANETGTA CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC FSEEALVATLQTWIDTDSKHTALKALQGMIWTSGYQNGDFTAHLYPDAVQRLRAWHAANV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCC PLYVYSSGSVPAQQLFFRHSHAGDLSGLFSGWFDTQIGGKRESTSYQRIAQHIGIAPAGI CEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHH VFLSDVIEELNAAAQIGLNTVLIDRRDDYPTPRHLKDTDRHLHLDSFAQLPF HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA