Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681677
Identifier: 182681677
GI number: 182681677
Start: 1281414
End: 1282583
Strand: Direct
Name: 182681677
Synonym: XfasM23_1135
Alternate gene names: NA
Gene position: 1281414-1282583 (Clockwise)
Preceding gene: 182681676
Following gene: 182681678
Centisome position: 50.54
GC content: 48.97
Gene sequence:
>1170_bases ATGAATATTTTGCGTAACCTCGCCCTGTGGTTCTTCCTATTAATCCTGGGCATATTCAGCGCACAATGGCTATTGCAGCA GCCAAACCGCGACTTGGGTGATGTAGTGATCCGGATCGGAGGCAATGATTACATCACGACAGTGCCACAAGCAACAATCC TACTACTGATAATAGTACTGCTACTGTGGTCGCTACGATCACTGCTGGTACTACCGATCCGGATTTGGAAGCGCTACAAA TACAAGCAAGGACATACACACTTAATCGAAGGCCTGCGCAATGTCGATCATGGGTATTGGCAACTTGCCGAACGGTTATT GATAGCAGCCAGCGAAGACACAGAAGTCAGTGCAATCGCACTAACAACAGCAATCCGCATGGCTGATATGCGCGGCGATT TTGATACAGCCAACGTATTGACAAACAAACTCGCCAAACAAGATCCAACTACACATGCACTACTGCAAAGTGAACGATTG CTGGCACTACAGCGCCCTAATGATGCGATTAATGTCCTGGATGCTCTAGAAACACACCGCCTACCCCCACGAGGTTTACT GATACGCGCACGCACACTGATACAGATCGGACGTGCCGACGAAGCCTACAGCTACCTCGGCACGTTGCGCGAACAGAGAT TACTCTCAGATCCTGAGTATGTGCGCTTTGAAAAAGAGACGATTGAGAATGTGATACGTCAAGCTAAAGACGCTAACGTT CTGACTGAACATTGGGAAGCGTTGCCCCAGGCACTAAAAACGCACCCAAACATCGTCGGCACATACGCTATCCGAGCAAC GGTACTGCACTTGGAAAATGCAGCAATGCTGAGCCTGGAACAAACTCTAGAAAGATCCTGGGACGAGAATTTGATACGCC TATATGGCTTTTTACCATTGAAGGAATATCAGACACGCCAAAACCGCGCAGAACACTGGCTAACGCTACACCCCGATAGC CCAAATTTATTACTGACTTTGGGACGATTAGCACTCCGGCAGCAGGAGTATAGTCAGGCGGAAACGTTTTTGCGCCGTGC CATTGACAAAGAGACGAACGCAGAAACTTGGGAGGAACTTGGCCACAACTACGCAGCCCAGGGTGATACGGTCCATGCAC AAGAATGCTACGCAAACGCGTTGCGTTTATATCATCCGTCCTCTAGTTGA
Upstream 100 bases:
>100_bases AACTCGCTTTACTCGCTAAAGCGGAATTACGTCCCACAATGTCTGAACTGGGTACCACGCTTATGCAATTACAAAGCATC CGCCTGGGAAGTCACCACCA
Downstream 100 bases:
>100_bases AACATACGTCGCATAACCTTAACAATTCACCATTTGTCTTTAACAAATGCGGTAACTAGTAACAGACTACACAAATCGCG TTGCATACAGCAGATTCTTG
Product: HemY domain-containing protein
Products: NA
Alternate protein names: HemY Domain-Containing Protein; HemY Domain Protein; Protein Of Heme Biosynthesis; Of Heme Biosynthesis; Transmembrane HemY Porphyrin Biosynthesis Protein; Metal Dependent Phosphohydrolase; HemY-Like; HemY-Like Protein
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MNILRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVLLLWSLRSLLVLPIRIWKRYK YKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEVSAIALTTAIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERL LALQRPNDAINVLDALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQAKDANV LTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDENLIRLYGFLPLKEYQTRQNRAEHWLTLHPDS PNLLLTLGRLALRQQEYSQAETFLRRAIDKETNAETWEELGHNYAAQGDTVHAQECYANALRLYHPSSS
Sequences:
>Translated_389_residues MNILRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVLLLWSLRSLLVLPIRIWKRYK YKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEVSAIALTTAIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERL LALQRPNDAINVLDALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQAKDANV LTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDENLIRLYGFLPLKEYQTRQNRAEHWLTLHPDS PNLLLTLGRLALRQQEYSQAETFLRRAIDKETNAETWEELGHNYAAQGDTVHAQECYANALRLYHPSSS >Mature_389_residues MNILRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVLLLWSLRSLLVLPIRIWKRYK YKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEVSAIALTTAIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERL LALQRPNDAINVLDALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQAKDANV LTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDENLIRLYGFLPLKEYQTRQNRAEHWLTLHPDS PNLLLTLGRLALRQQEYSQAETFLRRAIDKETNAETWEELGHNYAAQGDTVHAQECYANALRLYHPSSS
Specific function: Unknown
COG id: COG3071
COG function: function code H; Uncharacterized enzyme of heme biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44683; Mature: 44683
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHH LLWSLRSLLVLPIRIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEVSAIA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHH LTTAIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLDALETHR HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHCC LPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQAKDANV CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHEECHHHHHHHHHHHCCCHH LTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDENLIRLYGFLPL HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH KEYQTRQNRAEHWLTLHPDSPNLLLTLGRLALRQQEYSQAETFLRRAIDKETNAETWEEL HHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH GHNYAAQGDTVHAQECYANALRLYHPSSS CCCCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNILRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHH LLWSLRSLLVLPIRIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEVSAIA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHH LTTAIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLDALETHR HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHCC LPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQAKDANV CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHEECHHHHHHHHHHHCCCHH LTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDENLIRLYGFLPL HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH KEYQTRQNRAEHWLTLHPDSPNLLLTLGRLALRQQEYSQAETFLRRAIDKETNAETWEEL HHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH GHNYAAQGDTVHAQECYANALRLYHPSSS CCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA