Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is ilvC [H]
Identifier: 182681649
GI number: 182681649
Start: 1254698
End: 1255705
Strand: Direct
Name: ilvC [H]
Synonym: XfasM23_1107
Alternate gene names: 182681649
Gene position: 1254698-1255705 (Clockwise)
Preceding gene: 182681648
Following gene: 182681650
Centisome position: 49.48
GC content: 50.3
Gene sequence:
>1008_bases ATGAGAAACACAAAGTCCACTTTGAAAATTGCAATCATCGGTTATGGAAGTCAGGGTCGGGCACATGCTCTGAACCTGCG TGACTCTGGTTTTGACATTATCGTCGGCCTGCGTCCAGGTGGAGCAACCGAAGCTAAAGCTCAGGCTGACGGTTTCACAG TGCAGTCTCCGGACCAAGCAGCGAAACATGCCGATTTAGTTGCTGTACTGACCCCAGACATGGTCCAAAAGAAACTCTAC GAAGAGGTTTTAGCACCAAACATAAAGCAAGGTGCTTGCCTATTATTCGCACATGGCCTAAACGTCCACTACAGCTTGAT TACCCCACGGAGCGATCTAGATGTGGTGCTCGTTGCCCCCAAGGGTCCTGGTGCACTGGTACGCCGCGAATACGAAATCG GACGTGGGGTGCCATGTATCTATGCAGTACATCAAGATCTCAGCAGCCATGCCGAGCAGCTGGCTTTAACCTACGCTGGT GGCCTAGGTGGTGCCCGTGCCAACATCATCAAAACAACTTTCAAGGAAGAAACTGAGACCGACTTGTTCGGTGAGCAAGC TGTGCTGTGCGGCGGTGTTTCCTCGCTAGTGCAAGCCGGCTTTGAAACCTTGGTTGAAGCCGGTTACCAGCCGGAAATCG CCTATTACGAAGTACTGCACGAATTGAAGTTAATCGTGGATCTGTTCTACGAAGGTGGCATCACCCGAATGCTGGAATTT GTCTCTGAAACCGCACAGTATGGCGACTATGTCAGTGGCCCACGCGTGATCGACCGCAGCACCAAGGAACGTATGAAAGC TGTGCTGAAGGATATCCAAGATGGCACCTTCACCAAACATTGGATTGCCGAATACCAAGCCGGCTTACCAAACTACAAGA AATATAAGCAAGCCGACCTGGAACACCCCATTGAAAAAGTCGGTAAGCAACTGCGTGCCAAGATGGTCTGGTTAAACAGC GAAAAAACAAATGACACAACGCATCCCATGAGTTCGAAGGTGGTTTAA
Upstream 100 bases:
>100_bases CGTTGCGCATCTCGTTCTCAGACATTAATAAACAGCCAACATATGCTATGCACTGTTGGTTAACGTTTCCATCACCACAG ATTATTCAAGGATGCTATTT
Downstream 100 bases:
>100_bases ACCTTCCGCCCTCCTCTCACTGCAACATATAGAAGGCCGCTACCACATGAACAGATCCGCACACAGCGCAACCCGCAATG GTGCGAGCTGGTTGACGCAT
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRNTKSTLKIAIIGYGSQGRAHALNLRDSGFDIIVGLRPGGATEAKAQADGFTVQSPDQAAKHADLVAVLTPDMVQKKLY EEVLAPNIKQGACLLFAHGLNVHYSLITPRSDLDVVLVAPKGPGALVRREYEIGRGVPCIYAVHQDLSSHAEQLALTYAG GLGGARANIIKTTFKEETETDLFGEQAVLCGGVSSLVQAGFETLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEF VSETAQYGDYVSGPRVIDRSTKERMKAVLKDIQDGTFTKHWIAEYQAGLPNYKKYKQADLEHPIEKVGKQLRAKMVWLNS EKTNDTTHPMSSKVV
Sequences:
>Translated_335_residues MRNTKSTLKIAIIGYGSQGRAHALNLRDSGFDIIVGLRPGGATEAKAQADGFTVQSPDQAAKHADLVAVLTPDMVQKKLY EEVLAPNIKQGACLLFAHGLNVHYSLITPRSDLDVVLVAPKGPGALVRREYEIGRGVPCIYAVHQDLSSHAEQLALTYAG GLGGARANIIKTTFKEETETDLFGEQAVLCGGVSSLVQAGFETLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEF VSETAQYGDYVSGPRVIDRSTKERMKAVLKDIQDGTFTKHWIAEYQAGLPNYKKYKQADLEHPIEKVGKQLRAKMVWLNS EKTNDTTHPMSSKVV >Mature_335_residues MRNTKSTLKIAIIGYGSQGRAHALNLRDSGFDIIVGLRPGGATEAKAQADGFTVQSPDQAAKHADLVAVLTPDMVQKKLY EEVLAPNIKQGACLLFAHGLNVHYSLITPRSDLDVVLVAPKGPGALVRREYEIGRGVPCIYAVHQDLSSHAEQLALTYAG GLGGARANIIKTTFKEETETDLFGEQAVLCGGVSSLVQAGFETLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEF VSETAQYGDYVSGPRVIDRSTKERMKAVLKDIQDGTFTKHWIAEYQAGLPNYKKYKQADLEHPIEKVGKQLRAKMVWLNS EKTNDTTHPMSSKVV
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=292, Percent_Identity=35.6164383561644, Blast_Score=147, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6323387, Length=318, Percent_Identity=33.0188679245283, Blast_Score=132, Evalue=6e-32,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 36766; Mature: 36766
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNTKSTLKIAIIGYGSQGRAHALNLRDSGFDIIVGLRPGGATEAKAQADGFTVQSPDQA CCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEECCCHHH AKHADLVAVLTPDMVQKKLYEEVLAPNIKQGACLLFAHGLNVHYSLITPRSDLDVVLVAP HHHCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEECC KGPGALVRREYEIGRGVPCIYAVHQDLSSHAEQLALTYAGGLGGARANIIKTTFKEETET CCCCHHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHH DLFGEQAVLCGGVSSLVQAGFETLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEF HHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VSETAQYGDYVSGPRVIDRSTKERMKAVLKDIQDGTFTKHWIAEYQAGLPNYKKYKQADL HHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHH EHPIEKVGKQLRAKMVWLNSEKTNDTTHPMSSKVV CCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MRNTKSTLKIAIIGYGSQGRAHALNLRDSGFDIIVGLRPGGATEAKAQADGFTVQSPDQA CCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEECCCHHH AKHADLVAVLTPDMVQKKLYEEVLAPNIKQGACLLFAHGLNVHYSLITPRSDLDVVLVAP HHHCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEECC KGPGALVRREYEIGRGVPCIYAVHQDLSSHAEQLALTYAGGLGGARANIIKTTFKEETET CCCCHHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHH DLFGEQAVLCGGVSSLVQAGFETLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEF HHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VSETAQYGDYVSGPRVIDRSTKERMKAVLKDIQDGTFTKHWIAEYQAGLPNYKKYKQADL HHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHH EHPIEKVGKQLRAKMVWLNSEKTNDTTHPMSSKVV CCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]