| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681622
Identifier: 182681622
GI number: 182681622
Start: 1225028
End: 1225648
Strand: Direct
Name: 182681622
Synonym: XfasM23_1080
Alternate gene names: NA
Gene position: 1225028-1225648 (Clockwise)
Preceding gene: 182681621
Following gene: 182681623
Centisome position: 48.31
GC content: 53.62
Gene sequence:
>621_bases ATGACGCAGTTACCTGCTGCCGTGTGTTTTTCCGGCAAATCCCTTTCCATTATTGATCGTGACGGTACGCCGTACTTGAG TGCACGCGAGTTAGCCCGTGCTTTGGGCTATGCCGATGAACGATCCGTATTGCGCATCTATGCACGTCGCACGGATGAGT TCACCGAACAAATGACCTGCGTGGTCAAATTGACCCCTCAGGGTGAGCAGGCCCGTGATATCCGTATCTTCAGCCCCCGT GGCTGCCACCTGGTGGCGATGTTCGCCCGTACTTCAGTCGCCGCCGCGTTTCGTCGCTGGGTGCTGGATGTGCTGGAAGT CCTTCCCTCGATCCGCAAGACGGGGAGCTATACCGCTACCGGAGCGCTCGTGAATGACGATGTGCTCTACAACATCTGGT TTCTGTGCTGCCACTTTAAAGGACTGTACGAAATGTCTTTTGAAAACAAGATTCCGCAAGCATTGTCTTGTCTTGGAGCC AGGAAAATGGGCGGAAGGCTTTACACCCATTTAGTGGATGGCATGGATGGAGGTGTTCTCAGAATAGAAAAAGCCCTCGG CCCACACATGGAACAGGCCGCCCAAAAGGTCATGGGCAATGCAAGGAGACATATCCAATGA
Upstream 100 bases:
>100_bases CCCGCCGTCTATGTCCGGTTTCTTACCCTCCCGACACCCACAGGTGCGGCGCGTAAGAACGTCTCTCCTGTGTTCTTCCA ATGACATAGGAGACGTTTTT
Downstream 100 bases:
>100_bases ACAACAACAGCAATAACAGCATCTACCTGCCCCCTCCCCCTCCATTGCCCTCTAGGAGCACTCACAATGGCACGCGGAAT TAACAAGGTGATCCTAGTCG
Product: prophage antirepressor-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTQLPAAVCFSGKSLSIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTCVVKLTPQGEQARDIRIFSPR GCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTATGALVNDDVLYNIWFLCCHFKGLYEMSFENKIPQALSCLGA RKMGGRLYTHLVDGMDGGVLRIEKALGPHMEQAAQKVMGNARRHIQ
Sequences:
>Translated_206_residues MTQLPAAVCFSGKSLSIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTCVVKLTPQGEQARDIRIFSPR GCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTATGALVNDDVLYNIWFLCCHFKGLYEMSFENKIPQALSCLGA RKMGGRLYTHLVDGMDGGVLRIEKALGPHMEQAAQKVMGNARRHIQ >Mature_205_residues TQLPAAVCFSGKSLSIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTCVVKLTPQGEQARDIRIFSPRG CHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTATGALVNDDVLYNIWFLCCHFKGLYEMSFENKIPQALSCLGAR KMGGRLYTHLVDGMDGGVLRIEKALGPHMEQAAQKVMGNARRHIQ
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23032; Mature: 22901
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLPAAVCFSGKSLSIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTC CCCCCCHHEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEE VVKLTPQGEQARDIRIFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTAT EEEECCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GALVNDDVLYNIWFLCCHFKGLYEMSFENKIPQALSCLGARKMGGRLYTHLVDGMDGGVL CCEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCE RIEKALGPHMEQAAQKVMGNARRHIQ EEHHHHCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQLPAAVCFSGKSLSIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTC CCCCCHHEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEE VVKLTPQGEQARDIRIFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTAT EEEECCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GALVNDDVLYNIWFLCCHFKGLYEMSFENKIPQALSCLGARKMGGRLYTHLVDGMDGGVL CCEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCE RIEKALGPHMEQAAQKVMGNARRHIQ EEHHHHCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA