| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681620
Identifier: 182681620
GI number: 182681620
Start: 1222322
End: 1223974
Strand: Direct
Name: 182681620
Synonym: XfasM23_1078
Alternate gene names: NA
Gene position: 1222322-1223974 (Clockwise)
Preceding gene: 182681619
Following gene: 182681621
Centisome position: 48.2
GC content: 57.17
Gene sequence:
>1653_bases ATGAACATCATTGAACTGACCCAAGGCACCCCGCAATGGCACACCCACCGCGCCAAGTATCTCAATGCCAGCGACGCACC GGCCATGATGGGATGCAGCCCCTATAAAAGCCGTGCCGAACTGATACGGGAACGCGCCACGGGGATCACCCCTGACTATG ACCAAGCCACGTTACAACGTTTTGCTGAGGGGCATCGCGTTGAAGAACTGGCACGCCCCTTGGCAGAACGCATCATCGGT GATGACCTGTATCCCTGTGTTGGTGTCGATGACATGTATTCGGCCAGCTTCGACGGCTTGACCTTGCTGGAAGACACCGT CTGGGAACACAAGCAACTCAATGACACGATTCGCGCCGCCATGACAGACGGCAGCACCGGCCAAGACCTGCCATTACATT ATCAAATACAGATGGAACACCAGAGCATGGTGTCCGGTGCCCAACGTGTCCTGTTCATGGCCTCGGCCTGGAACGGTGAA CAGCTCATAGAAGAACGTCATTGCTGGTACACCCCCAACCCCGAATTACGTACCCGCATCATCAACGGATGGCAACAACT GCAAGCGGACATTGCCGCCTACCAGCCTGAGCCACCACCACCGCCTGCGGCCTTGGGGCGTTCACCAGAGCAACTACCGG CATTGCATATTGCAGTCACAGGAACAGTGACCACCTCCAACCTGCCGCACTTCAAAGCCTGCGCACTAGCCGTATTGCAC AACATCAACCGTGACCTGCGCACCGATGAGGATTTTGCCAACGCAGAACAAACCGTGAAATGGTGCAAAGGCGTCGAGAC GCGCCTAGACGCCACCAAACAACAGGTATTAGGACAAACCGCCGACATCGATGCCGTCTTCCGCACCCTGGACGAAATCG CCGAAGAAACCCGCCGCGTCCGTCTTGAGTTGGATCGCTTGGTGAAAACCGAGAAAGATCACCGCCGTACTGAGATTGTC CACACCGGCCTGAAGACCCTGCGTGACTACTACGCCAGCCTCAACGCGAGGTTAGAGGAGTATGCCCTACCGATTCCGGC TGATTTGCCTGCAAAGATCGGTGACACCATCAAAGGCAAGAAGTCGATGATCAGCATGCAGGAGGCTGTGAGCGCCGCCG TGGCTCACGAGAAGATCAACATCACTGCCCACGTGGAACGGGTGCGCGCCAATATCACCGTGATGGAAGCATGTGAGGCG GCTTACCGCTCCCTGTTTCCAGACAGGGTGAGTCTATGCATCAGCAAAACACCCGATGACCTGCGCAATCTGATCCTTGC CCGCATTGCCGATCATCAGCAGCAGGAACAGGCACGCATCCAAGCCCAACGCGAGCGCCAGAACACCGCAGCAGCGGTGC CCGTCCACGTGCCGCCATCACCACATCCCTCCTCGGAATTGAGTTCAACCACCAGCAGCGCCACTGCCGCACCCGCATCC AGCGGTGACCTCATCAGACTGCGCCAGATCAATGAGTGGATTGCCCCGCTAGCGATCAATTCCGATGGATTAGCGTCACT GGGGTTTGTTCCCGTCAGTACCGAATACGACGTCAAGTGGTACGCCGCTGCTGAATTTCCTGTGATCTGTCATGCCTTGA AACAGGTGTTGTCCGACGCTTCATCCCGCACCGCCATCAAGCAGGCCGCGTGA
Upstream 100 bases:
>100_bases TCACCGCCATTCGCGCCTGCGCAGAAGACACCAGTGCTGAGCCTGTGCCTACAGACAACACCCCACAGGAAAGCAACACC ACTGACACGGAAGAAAACAC
Downstream 100 bases:
>100_bases TGGAACGCCCCATCAATATCAAAAGACAATGCCCCCTATGAACAACACGTTTGAATACAAATTCTCAGATGACTTGATCG CAAAGGCGCGGCACTGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MNIIELTQGTPQWHTHRAKYLNASDAPAMMGCSPYKSRAELIRERATGITPDYDQATLQRFAEGHRVEELARPLAERIIG DDLYPCVGVDDMYSASFDGLTLLEDTVWEHKQLNDTIRAAMTDGSTGQDLPLHYQIQMEHQSMVSGAQRVLFMASAWNGE QLIEERHCWYTPNPELRTRIINGWQQLQADIAAYQPEPPPPPAALGRSPEQLPALHIAVTGTVTTSNLPHFKACALAVLH NINRDLRTDEDFANAEQTVKWCKGVETRLDATKQQVLGQTADIDAVFRTLDEIAEETRRVRLELDRLVKTEKDHRRTEIV HTGLKTLRDYYASLNARLEEYALPIPADLPAKIGDTIKGKKSMISMQEAVSAAVAHEKINITAHVERVRANITVMEACEA AYRSLFPDRVSLCISKTPDDLRNLILARIADHQQQEQARIQAQRERQNTAAAVPVHVPPSPHPSSELSSTTSSATAAPAS SGDLIRLRQINEWIAPLAINSDGLASLGFVPVSTEYDVKWYAAAEFPVICHALKQVLSDASSRTAIKQAA
Sequences:
>Translated_550_residues MNIIELTQGTPQWHTHRAKYLNASDAPAMMGCSPYKSRAELIRERATGITPDYDQATLQRFAEGHRVEELARPLAERIIG DDLYPCVGVDDMYSASFDGLTLLEDTVWEHKQLNDTIRAAMTDGSTGQDLPLHYQIQMEHQSMVSGAQRVLFMASAWNGE QLIEERHCWYTPNPELRTRIINGWQQLQADIAAYQPEPPPPPAALGRSPEQLPALHIAVTGTVTTSNLPHFKACALAVLH NINRDLRTDEDFANAEQTVKWCKGVETRLDATKQQVLGQTADIDAVFRTLDEIAEETRRVRLELDRLVKTEKDHRRTEIV HTGLKTLRDYYASLNARLEEYALPIPADLPAKIGDTIKGKKSMISMQEAVSAAVAHEKINITAHVERVRANITVMEACEA AYRSLFPDRVSLCISKTPDDLRNLILARIADHQQQEQARIQAQRERQNTAAAVPVHVPPSPHPSSELSSTTSSATAAPAS SGDLIRLRQINEWIAPLAINSDGLASLGFVPVSTEYDVKWYAAAEFPVICHALKQVLSDASSRTAIKQAA >Mature_550_residues MNIIELTQGTPQWHTHRAKYLNASDAPAMMGCSPYKSRAELIRERATGITPDYDQATLQRFAEGHRVEELARPLAERIIG DDLYPCVGVDDMYSASFDGLTLLEDTVWEHKQLNDTIRAAMTDGSTGQDLPLHYQIQMEHQSMVSGAQRVLFMASAWNGE QLIEERHCWYTPNPELRTRIINGWQQLQADIAAYQPEPPPPPAALGRSPEQLPALHIAVTGTVTTSNLPHFKACALAVLH NINRDLRTDEDFANAEQTVKWCKGVETRLDATKQQVLGQTADIDAVFRTLDEIAEETRRVRLELDRLVKTEKDHRRTEIV HTGLKTLRDYYASLNARLEEYALPIPADLPAKIGDTIKGKKSMISMQEAVSAAVAHEKINITAHVERVRANITVMEACEA AYRSLFPDRVSLCISKTPDDLRNLILARIADHQQQEQARIQAQRERQNTAAAVPVHVPPSPHPSSELSSTTSSATAAPAS SGDLIRLRQINEWIAPLAINSDGLASLGFVPVSTEYDVKWYAAAEFPVICHALKQVLSDASSRTAIKQAA
Specific function: Unknown
COG id: COG5377
COG function: function code L; Phage-related protein, predicted endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61119; Mature: 61119
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIELTQGTPQWHTHRAKYLNASDAPAMMGCSPYKSRAELIRERATGITPDYDQATLQR CCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH FAEGHRVEELARPLAERIIGDDLYPCVGVDDMYSASFDGLTLLEDTVWEHKQLNDTIRAA HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH MTDGSTGQDLPLHYQIQMEHQSMVSGAQRVLFMASAWNGEQLIEERHCWYTPNPELRTRI HCCCCCCCCCCEEEEEEEHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCCCHHHHHHH INGWQQLQADIAAYQPEPPPPPAALGRSPEQLPALHIAVTGTVTTSNLPHFKACALAVLH HHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHH NINRDLRTDEDFANAEQTVKWCKGVETRLDATKQQVLGQTADIDAVFRTLDEIAEETRRV HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RLELDRLVKTEKDHRRTEIVHTGLKTLRDYYASLNARLEEYALPIPADLPAKIGDTIKGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCH KSMISMQEAVSAAVAHEKINITAHVERVRANITVMEACEAAYRSLFPDRVSLCISKTPDD HHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH LRNLILARIADHQQQEQARIQAQRERQNTAAAVPVHVPPSPHPSSELSSTTSSATAAPAS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCC SGDLIRLRQINEWIAPLAINSDGLASLGFVPVSTEYDVKWYAAAEFPVICHALKQVLSDA CCCEEEHHHHHHHHCCEEECCCCCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHCC SSRTAIKQAA HHHHHHHHCC >Mature Secondary Structure MNIIELTQGTPQWHTHRAKYLNASDAPAMMGCSPYKSRAELIRERATGITPDYDQATLQR CCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH FAEGHRVEELARPLAERIIGDDLYPCVGVDDMYSASFDGLTLLEDTVWEHKQLNDTIRAA HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH MTDGSTGQDLPLHYQIQMEHQSMVSGAQRVLFMASAWNGEQLIEERHCWYTPNPELRTRI HCCCCCCCCCCEEEEEEEHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCCCHHHHHHH INGWQQLQADIAAYQPEPPPPPAALGRSPEQLPALHIAVTGTVTTSNLPHFKACALAVLH HHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHH NINRDLRTDEDFANAEQTVKWCKGVETRLDATKQQVLGQTADIDAVFRTLDEIAEETRRV HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RLELDRLVKTEKDHRRTEIVHTGLKTLRDYYASLNARLEEYALPIPADLPAKIGDTIKGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCH KSMISMQEAVSAAVAHEKINITAHVERVRANITVMEACEAAYRSLFPDRVSLCISKTPDD HHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH LRNLILARIADHQQQEQARIQAQRERQNTAAAVPVHVPPSPHPSSELSSTTSSATAAPAS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCC SGDLIRLRQINEWIAPLAINSDGLASLGFVPVSTEYDVKWYAAAEFPVICHALKQVLSDA CCCEEEHHHHHHHHCCEEECCCCCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHCC SSRTAIKQAA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA