| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681531
Identifier: 182681531
GI number: 182681531
Start: 1141722
End: 1142876
Strand: Direct
Name: 182681531
Synonym: XfasM23_0985
Alternate gene names: NA
Gene position: 1141722-1142876 (Clockwise)
Preceding gene: 182681530
Following gene: 182681533
Centisome position: 45.03
GC content: 50.56
Gene sequence:
>1155_bases ATGCCTATTCATGTTATTACTGCGCTTCCTGGTGGTGGGAAAACAGCCATCATGGTTGAGATGCTAGAGGCAGAAGCCAA GATTGGTGCACGTCCGTTATTTGCGGCGGGTATTGATGGTCTTCAGCCTGGTCTTGCTACTGTGCTTGATGATCCTTCAC AGTGGAATGCTAAGGATGCTCATGGCAATTATGTTGTTCCTGATGGTTCTCTAGTTTTTGTGGATGAAGCATGGAAGTGG TTCGGTATGAAGTATGGTGGTAGCGGTATGCGTCAGACTACGCCAGATCATGTGCGGGCGCTTGCCGAGCATCGTCATCG CGGTTTGGATTTTGTATGGACAACACAGCAAGCTCATAAGCAGCTCTATTCTTTTGTTCACGGTTTAATTGGTCGTCATA CCTTTATTAAGCGTCGTTTTGGTACGCGTTTTCTTGATGTGTGGGAGTGGGATGAGATGGTGGAGAATGTGAACTCTGCC TCTAATCGTGAGTTTTCTCGCCACCAGGTGCGTACGCTCCCTAAGCATGTCTATAGTTTGTATAAGTCTGCTGAGATTCA TACGATCAAGTCTCGTATTCCCTTGCGGCTTCTTCTCATTCCTTTGTGTGCTGTTTTGTTTTTTGTTTGTGTGTGGAATG CCTGGCGTAGTTTGCGTCCTGATGCTATTGGCACCACGTTGTTTGGCCAGCAGTCCCCACAAAAGGCGGAGCCTGCGAAG CCGGTGGGGACTGCCAGCCGGTCATCTGGGGGGACTGTAGGAGGAGGGCAAGCTCCGCGCTGGGCAACAGCTGTTGCTTA TGCGCGAGATCATTTGCCGCGTTTTCCTACGATGCCGTGGACGGCTCCTATTTTTGACAGTCGTTCTTTGACGGCGGACC CTCAATTGATCTGTATGTCTGGCGGTGAAGGTTTGGATGCCCAGGGGCATTATAAGGGGGCATCTTGTACGTGTTACACG GAGCAGGGCACGCTATATGATCTTTTGGAGGCTGAATGTCGGCGTATTGCACGCTCTGGGCCTGTTTACAATCCGTATCG TGAACGTGTTCAAGATCGTGCTGCGGTGCAGCAGTCTGGTTTATCTGGTCCGGTGATGCCTGTCAGTAATGAGGTGCGTA GTGTGTCTGTCTCTTCTGCTGGAGCGCTTCCATGA
Upstream 100 bases:
>100_bases ATGCTCAATGGCCGGTTGTATCTGTTTAAGCGAGGTTATGGAGTGGCTCCTCCAGCTTCTCCAAAGCATGAGCCGTTTAT TCCACCAGCGGGGTAATGTT
Downstream 100 bases:
>100_bases GTTTTTGCTAGCATACATCATCTGATGATGCAATGGATGCATATATACATCTTCCCGTCAATAGTTTATGAAGCATTCAT AGTTATGAGATTCATTCATA
Product: zonular occludens toxin
Products: NA
Alternate protein names: Filamentous Phage Cf1c Related Protein; Zonula Occludens xin Family Protein; Phage Assembly Protein; Bacteriophage Protein
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MPIHVITALPGGGKTAIMVEMLEAEAKIGARPLFAAGIDGLQPGLATVLDDPSQWNAKDAHGNYVVPDGSLVFVDEAWKW FGMKYGGSGMRQTTPDHVRALAEHRHRGLDFVWTTQQAHKQLYSFVHGLIGRHTFIKRRFGTRFLDVWEWDEMVENVNSA SNREFSRHQVRTLPKHVYSLYKSAEIHTIKSRIPLRLLLIPLCAVLFFVCVWNAWRSLRPDAIGTTLFGQQSPQKAEPAK PVGTASRSSGGTVGGGQAPRWATAVAYARDHLPRFPTMPWTAPIFDSRSLTADPQLICMSGGEGLDAQGHYKGASCTCYT EQGTLYDLLEAECRRIARSGPVYNPYRERVQDRAAVQQSGLSGPVMPVSNEVRSVSVSSAGALP
Sequences:
>Translated_384_residues MPIHVITALPGGGKTAIMVEMLEAEAKIGARPLFAAGIDGLQPGLATVLDDPSQWNAKDAHGNYVVPDGSLVFVDEAWKW FGMKYGGSGMRQTTPDHVRALAEHRHRGLDFVWTTQQAHKQLYSFVHGLIGRHTFIKRRFGTRFLDVWEWDEMVENVNSA SNREFSRHQVRTLPKHVYSLYKSAEIHTIKSRIPLRLLLIPLCAVLFFVCVWNAWRSLRPDAIGTTLFGQQSPQKAEPAK PVGTASRSSGGTVGGGQAPRWATAVAYARDHLPRFPTMPWTAPIFDSRSLTADPQLICMSGGEGLDAQGHYKGASCTCYT EQGTLYDLLEAECRRIARSGPVYNPYRERVQDRAAVQQSGLSGPVMPVSNEVRSVSVSSAGALP >Mature_383_residues PIHVITALPGGGKTAIMVEMLEAEAKIGARPLFAAGIDGLQPGLATVLDDPSQWNAKDAHGNYVVPDGSLVFVDEAWKWF GMKYGGSGMRQTTPDHVRALAEHRHRGLDFVWTTQQAHKQLYSFVHGLIGRHTFIKRRFGTRFLDVWEWDEMVENVNSAS NREFSRHQVRTLPKHVYSLYKSAEIHTIKSRIPLRLLLIPLCAVLFFVCVWNAWRSLRPDAIGTTLFGQQSPQKAEPAKP VGTASRSSGGTVGGGQAPRWATAVAYARDHLPRFPTMPWTAPIFDSRSLTADPQLICMSGGEGLDAQGHYKGASCTCYTE QGTLYDLLEAECRRIARSGPVYNPYRERVQDRAAVQQSGLSGPVMPVSNEVRSVSVSSAGALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42311; Mature: 42179
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIHVITALPGGGKTAIMVEMLEAEAKIGARPLFAAGIDGLQPGLATVLDDPSQWNAKDA CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCC HGNYVVPDGSLVFVDEAWKWFGMKYGGSGMRQTTPDHVRALAEHRHRGLDFVWTTQQAHK CCCEECCCCCEEEEECHHHHHCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHH QLYSFVHGLIGRHTFIKRRFGTRFLDVWEWDEMVENVNSASNREFSRHQVRTLPKHVYSL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH YKSAEIHTIKSRIPLRLLLIPLCAVLFFVCVWNAWRSLRPDAIGTTLFGQQSPQKAEPAK HHCCHHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHCCCCCCCCCCCCC PVGTASRSSGGTVGGGQAPRWATAVAYARDHLPRFPTMPWTAPIFDSRSLTADPQLICMS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GGEGLDAQGHYKGASCTCYTEQGTLYDLLEAECRRIARSGPVYNPYRERVQDRAAVQQSG CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC LSGPVMPVSNEVRSVSVSSAGALP CCCCCCCCCCHHHEEECCCCCCCC >Mature Secondary Structure PIHVITALPGGGKTAIMVEMLEAEAKIGARPLFAAGIDGLQPGLATVLDDPSQWNAKDA CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCC HGNYVVPDGSLVFVDEAWKWFGMKYGGSGMRQTTPDHVRALAEHRHRGLDFVWTTQQAHK CCCEECCCCCEEEEECHHHHHCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHH QLYSFVHGLIGRHTFIKRRFGTRFLDVWEWDEMVENVNSASNREFSRHQVRTLPKHVYSL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH YKSAEIHTIKSRIPLRLLLIPLCAVLFFVCVWNAWRSLRPDAIGTTLFGQQSPQKAEPAK HHCCHHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHCCCCCCCCCCCCC PVGTASRSSGGTVGGGQAPRWATAVAYARDHLPRFPTMPWTAPIFDSRSLTADPQLICMS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GGEGLDAQGHYKGASCTCYTEQGTLYDLLEAECRRIARSGPVYNPYRERVQDRAAVQQSG CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC LSGPVMPVSNEVRSVSVSSAGALP CCCCCCCCCCHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA