| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681466
Identifier: 182681466
GI number: 182681466
Start: 1087766
End: 1088185
Strand: Reverse
Name: 182681466
Synonym: XfasM23_0918
Alternate gene names: NA
Gene position: 1088185-1087766 (Counterclockwise)
Preceding gene: 182681468
Following gene: 182681465
Centisome position: 42.91
GC content: 55.71
Gene sequence:
>420_bases ATGGTCGCCTACGCCACCAATAGCGGCATGGAAAACGCCCCCTTGGCGATCAACAAGGCCAAGATTGTGATCACTCAGGC CGTCATCGTTGCCGAACAACACGCCAACGGCAAGGCATCACGCGCCGGGCACGAGAACTCGGAGCAGATCTGGGTCTATG ACGTGGAAATGGAATCACTCAACCAAATTCTTTTTCTCTCCATCAATGCCCCGGAGCATCCCGGCGCCCTGACATTGATG GTGCCTATTTCCCTTGGCGAGTGGTTCATTTGGACGGTGCCACTCCTGATCGGCATCGGCTGGCTACGCGACAGTGAGAA CACCTGCAAGACGATGCTTGTCGCAACCGCATCGGGATTGCTCGGCCTATTCCTCATTCCCAAGCGATCACCTGACCCTG TGCTAGGCAATTGCTTTTAG
Upstream 100 bases:
>100_bases TAAGTACGAGCTAAGTCTGCCTGCATAGCTTCTCCCCATCCCCATCCCCATCCCCATCCCCATCCCCATCGCCATCGCCA TCGCCATCGCCGCAACCGGC
Downstream 100 bases:
>100_bases CCTCGCGCTGCAAAGAGGTCCGCGAATCGCAGGCACCGGGTTGACCTTGTTAGGTATTCCCATTGCTTGGGCACGCATCT ACCTTGGGGTTCACTTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MVAYATNSGMENAPLAINKAKIVITQAVIVAEQHANGKASRAGHENSEQIWVYDVEMESLNQILFLSINAPEHPGALTLM VPISLGEWFIWTVPLLIGIGWLRDSENTCKTMLVATASGLLGLFLIPKRSPDPVLGNCF
Sequences:
>Translated_139_residues MVAYATNSGMENAPLAINKAKIVITQAVIVAEQHANGKASRAGHENSEQIWVYDVEMESLNQILFLSINAPEHPGALTLM VPISLGEWFIWTVPLLIGIGWLRDSENTCKTMLVATASGLLGLFLIPKRSPDPVLGNCF >Mature_139_residues MVAYATNSGMENAPLAINKAKIVITQAVIVAEQHANGKASRAGHENSEQIWVYDVEMESLNQILFLSINAPEHPGALTLM VPISLGEWFIWTVPLLIGIGWLRDSENTCKTMLVATASGLLGLFLIPKRSPDPVLGNCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15102; Mature: 15102
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAYATNSGMENAPLAINKAKIVITQAVIVAEQHANGKASRAGHENSEQIWVYDVEMESL CEEEECCCCCCCCCEEECCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHC NQILFLSINAPEHPGALTLMVPISLGEWFIWTVPLLIGIGWLRDSENTCKTMLVATASGL CEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCEECCCCHHHEEEEEHHCCC LGLFLIPKRSPDPVLGNCF EEEEEECCCCCCCCCCCCC >Mature Secondary Structure MVAYATNSGMENAPLAINKAKIVITQAVIVAEQHANGKASRAGHENSEQIWVYDVEMESL CEEEECCCCCCCCCEEECCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHC NQILFLSINAPEHPGALTLMVPISLGEWFIWTVPLLIGIGWLRDSENTCKTMLVATASGL CEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCEECCCCHHHEEEEEHHCCC LGLFLIPKRSPDPVLGNCF EEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA