| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is gltP [H]
Identifier: 182681458
GI number: 182681458
Start: 1079624
End: 1080922
Strand: Direct
Name: gltP [H]
Synonym: XfasM23_0909
Alternate gene names: 182681458
Gene position: 1079624-1080922 (Clockwise)
Preceding gene: 182681457
Following gene: 182681459
Centisome position: 42.58
GC content: 51.73
Gene sequence:
>1299_bases ATGACTTCATCTGCTGCTGCTTCTCATTCCGGCCTGCCAATGCACTGGAAGATGAGCATAGGTTTTCTTGGCGGTTTGCT AATCGGCTTGGCTGCGCACTATTGGGTTGGTGCTGATGTCGTTTGGGTGCAACATGCCACCCATTATCTCACCACACCGT TTTCCAAGTTATTCCTCAATCTGATCTTCATGCTGATTGTGCCCTTGATGTTCTCGGCACTCGTGGTCGGCGTGGCCGAA ATGGGGGACATCAGCGCACTCGGTCGCATCGGTTGGCGTACCCTGGGTTATACCGTTGTGCTCTCATCCGTGGCTGTGTT AATCGGATTGGTGCTTGTCAACGTACTCAAACCAGGTGTGGGTGTCGATCCGCAGTTGGCGCAGCAGCTGCTTAGTGAAA ATGCGGAGCGTAGCCGCCAGATCGTCGATTCCACAGATACCCAAATCCACGGCATGGATATGCTGTTATCAATCGTACCG AGCAACGTAGTCGCAGCGGCTTCCAGCAACGATGCCATTTTATCGCTGATGTTCTTCACGATCATGTTTGGCATTGGTAT GGTTCTGGTGCCGCAGGAGAAGGTAGAGACACTGAAGCGTGCTATTGAGGGTGTATTTGAAGTTTCGATGGTCTTGATTG GACTGGTGATCCGTCTTGCACCCTATGCAGTAGCCTGCTTTATGTTCAACTTGACGTCGTTATTCGGCCTAGAGTTGTTG ATACGGTTGGCGGCTTATGTCGGTGTTGTGGTCCTGGGGTTGTCGCTGCATATGTTTGTTACCTATGGTTTAGCAGTATG GTGGGCGGGGCGTTCACCGCTGCGTTTTTTCCGCGAAACTCAAGAAGCAACCTTGATGGCGTTCTCTACAGCCTCTAGCA ATGCCACTTTGCCAACCGCGCTGCGTGTTGCTGACGATATGAAGCTACCGAAAAAAATTTCGCGTTTCGTACTGACCATT GGTGCAACTGCTAATCAAAATGGCACGGCATTGTTTGAAGGTTTGACCGTCATTTTCCTGGCGCAATTTTTTGGTGTGGA CCTCAGTTTTAGTCAGCAAGCGATGGTCATGGCAGTATGCATCCTGGGTGGCATCGGCACCGCTGGTGTACCGTCCGGCT CGCTTCCAGTGGTGGCACTCATCTGTGCCATGGTCGGGGTTGATCCTGTCGGTATTGGGCTGATTTTGGGGGTGAACCAC TTCCTGGACATGTGCCGCACTGCATTAAATGTGACTGGCGATCTAGCATTGACTACATTGGTGTGCAGAGGCGAGCCTCA GGCAGAAGGAAGTGCTTAG
Upstream 100 bases:
>100_bases TCCTGCCTTTGTTGTATCAGTGTGAGTGTGATTGCGTGTGTGGTTTAGCGATAATGTTTGCTACTCTTCGCTTCCATCTT TGCCTGAGAGGCTAGAATTG
Downstream 100 bases:
>100_bases TGGCTTATGGAATCAGTGGGCCTTGATCTGAGATCGTGTCACTGTGGGACAATAGTGGGGCATCGTATGACTTTCACGAT GCCCCTTTCTCTACCGTCGA
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTSSAAASHSGLPMHWKMSIGFLGGLLIGLAAHYWVGADVVWVQHATHYLTTPFSKLFLNLIFMLIVPLMFSALVVGVAE MGDISALGRIGWRTLGYTVVLSSVAVLIGLVLVNVLKPGVGVDPQLAQQLLSENAERSRQIVDSTDTQIHGMDMLLSIVP SNVVAAASSNDAILSLMFFTIMFGIGMVLVPQEKVETLKRAIEGVFEVSMVLIGLVIRLAPYAVACFMFNLTSLFGLELL IRLAAYVGVVVLGLSLHMFVTYGLAVWWAGRSPLRFFRETQEATLMAFSTASSNATLPTALRVADDMKLPKKISRFVLTI GATANQNGTALFEGLTVIFLAQFFGVDLSFSQQAMVMAVCILGGIGTAGVPSGSLPVVALICAMVGVDPVGIGLILGVNH FLDMCRTALNVTGDLALTTLVCRGEPQAEGSA
Sequences:
>Translated_432_residues MTSSAAASHSGLPMHWKMSIGFLGGLLIGLAAHYWVGADVVWVQHATHYLTTPFSKLFLNLIFMLIVPLMFSALVVGVAE MGDISALGRIGWRTLGYTVVLSSVAVLIGLVLVNVLKPGVGVDPQLAQQLLSENAERSRQIVDSTDTQIHGMDMLLSIVP SNVVAAASSNDAILSLMFFTIMFGIGMVLVPQEKVETLKRAIEGVFEVSMVLIGLVIRLAPYAVACFMFNLTSLFGLELL IRLAAYVGVVVLGLSLHMFVTYGLAVWWAGRSPLRFFRETQEATLMAFSTASSNATLPTALRVADDMKLPKKISRFVLTI GATANQNGTALFEGLTVIFLAQFFGVDLSFSQQAMVMAVCILGGIGTAGVPSGSLPVVALICAMVGVDPVGIGLILGVNH FLDMCRTALNVTGDLALTTLVCRGEPQAEGSA >Mature_431_residues TSSAAASHSGLPMHWKMSIGFLGGLLIGLAAHYWVGADVVWVQHATHYLTTPFSKLFLNLIFMLIVPLMFSALVVGVAEM GDISALGRIGWRTLGYTVVLSSVAVLIGLVLVNVLKPGVGVDPQLAQQLLSENAERSRQIVDSTDTQIHGMDMLLSIVPS NVVAAASSNDAILSLMFFTIMFGIGMVLVPQEKVETLKRAIEGVFEVSMVLIGLVIRLAPYAVACFMFNLTSLFGLELLI RLAAYVGVVVLGLSLHMFVTYGLAVWWAGRSPLRFFRETQEATLMAFSTASSNATLPTALRVADDMKLPKKISRFVLTIG ATANQNGTALFEGLTVIFLAQFFGVDLSFSQQAMVMAVCILGGIGTAGVPSGSLPVVALICAMVGVDPVGIGLILGVNHF LDMCRTALNVTGDLALTTLVCRGEPQAEGSA
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=437, Percent_Identity=27.4599542334096, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI40254478, Length=419, Percent_Identity=26.9689737470167, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI66773030, Length=387, Percent_Identity=26.6149870801034, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI21314632, Length=405, Percent_Identity=27.4074074074074, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI5032093, Length=381, Percent_Identity=30.1837270341207, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI169790839, Length=432, Percent_Identity=27.0833333333333, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI223468564, Length=248, Percent_Identity=33.0645161290323, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI223468566, Length=248, Percent_Identity=33.0645161290323, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI194239697, Length=189, Percent_Identity=34.9206349206349, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI301601644, Length=146, Percent_Identity=34.9315068493151, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI262359914, Length=370, Percent_Identity=25.9459459459459, Blast_Score=86, Evalue=9e-17, Organism=Escherichia coli, GI1790514, Length=415, Percent_Identity=31.3253012048193, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1789947, Length=375, Percent_Identity=28, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1788024, Length=414, Percent_Identity=26.0869565217391, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1789473, Length=266, Percent_Identity=28.1954887218045, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71996953, Length=439, Percent_Identity=28.4738041002278, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI71983106, Length=411, Percent_Identity=29.1970802919708, Blast_Score=147, Evalue=7e-36, Organism=Caenorhabditis elegans, GI71983099, Length=411, Percent_Identity=29.1970802919708, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17537407, Length=391, Percent_Identity=28.1329923273657, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI193206505, Length=403, Percent_Identity=29.7766749379653, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17541374, Length=403, Percent_Identity=28.0397022332506, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI193206654, Length=405, Percent_Identity=25.9259259259259, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI24583025, Length=428, Percent_Identity=28.7383177570093, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI17137668, Length=428, Percent_Identity=28.7383177570093, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI24583023, Length=428, Percent_Identity=28.7383177570093, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI281360481, Length=415, Percent_Identity=25.0602409638554, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI281360483, Length=415, Percent_Identity=25.0602409638554, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI17137666, Length=415, Percent_Identity=25.0602409638554, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45927; Mature: 45796
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSAAASHSGLPMHWKMSIGFLGGLLIGLAAHYWVGADVVWVQHATHYLTTPFSKLFLN CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH LIFMLIVPLMFSALVVGVAEMGDISALGRIGWRTLGYTVVLSSVAVLIGLVLVNVLKPGV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GVDPQLAQQLLSENAERSRQIVDSTDTQIHGMDMLLSIVPSNVVAAASSNDAILSLMFFT CCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHH IMFGIGMVLVPQEKVETLKRAIEGVFEVSMVLIGLVIRLAPYAVACFMFNLTSLFGLELL HHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRLAAYVGVVVLGLSLHMFVTYGLAVWWAGRSPLRFFRETQEATLMAFSTASSNATLPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHH LRVADDMKLPKKISRFVLTIGATANQNGTALFEGLTVIFLAQFFGVDLSFSQQAMVMAVC HHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ILGGIGTAGVPSGSLPVVALICAMVGVDPVGIGLILGVNHFLDMCRTALNVTGDLALTTL HHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VCRGEPQAEGSA EECCCCCCCCCC >Mature Secondary Structure TSSAAASHSGLPMHWKMSIGFLGGLLIGLAAHYWVGADVVWVQHATHYLTTPFSKLFLN CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH LIFMLIVPLMFSALVVGVAEMGDISALGRIGWRTLGYTVVLSSVAVLIGLVLVNVLKPGV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GVDPQLAQQLLSENAERSRQIVDSTDTQIHGMDMLLSIVPSNVVAAASSNDAILSLMFFT CCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHH IMFGIGMVLVPQEKVETLKRAIEGVFEVSMVLIGLVIRLAPYAVACFMFNLTSLFGLELL HHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRLAAYVGVVVLGLSLHMFVTYGLAVWWAGRSPLRFFRETQEATLMAFSTASSNATLPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHH LRVADDMKLPKKISRFVLTIGATANQNGTALFEGLTVIFLAQFFGVDLSFSQQAMVMAVC HHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ILGGIGTAGVPSGSLPVVALICAMVGVDPVGIGLILGVNHFLDMCRTALNVTGDLALTTL HHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VCRGEPQAEGSA EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]