| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681454
Identifier: 182681454
GI number: 182681454
Start: 1076703
End: 1077095
Strand: Reverse
Name: 182681454
Synonym: XfasM23_0905
Alternate gene names: NA
Gene position: 1077095-1076703 (Counterclockwise)
Preceding gene: 182681460
Following gene: 182681453
Centisome position: 42.48
GC content: 47.33
Gene sequence:
>393_bases ATGGCAAAAATCGCCAAGAACGTGAAGGCTGCTCCGAAGAAGGCAGTGAAAAAACAAACCGCTAAGCCGGCCACCATCAA ACCGATCAAAGAAACACTGAGTAAATCTGCTTTGGTAGCTCACTTGGCTGAATCCAGTGCATTGGCAGCCAAGGATGTAC GCACTTTACTGGGTGCTCTGGAGAATACCATTCATGCCTCACTGCATAAGAAGGGAGTTGGTAGTTTCACCCTACCAGGT TTGTTGAAGATCAGTACGGTCAATGTGCCTGCCAAGCCAAAACGCAAGGGAATCAATCCTTTTACCAAAGAAGAGCAATG GTTTGCTGCCAAGCCAGCTTCGGTAAAGATCAAGACCCGCCCGTTAAAAAAGCTTAAAGACGCGACACTTTGA
Upstream 100 bases:
>100_bases ACCTATTGGCTCCCATCTACAGTTACCCTACATTATTGCGCTTGCCGATCTACGGTGTCGGCAAGACCCAACCACCACTT GATTTATGGAACAGGACACC
Downstream 100 bases:
>100_bases TGACTTACGCAGTAAAGCGATTGGGGCGGTCTTGGCCATCTCAATTGCTTTTGAGGTCACCTTGTCCTCTGCAAGCGCTG TTTTTTTGTATATGAATTTT
Product: histone family protein DNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAKIAKNVKAAPKKAVKKQTAKPATIKPIKETLSKSALVAHLAESSALAAKDVRTLLGALENTIHASLHKKGVGSFTLPG LLKISTVNVPAKPKRKGINPFTKEEQWFAAKPASVKIKTRPLKKLKDATL
Sequences:
>Translated_130_residues MAKIAKNVKAAPKKAVKKQTAKPATIKPIKETLSKSALVAHLAESSALAAKDVRTLLGALENTIHASLHKKGVGSFTLPG LLKISTVNVPAKPKRKGINPFTKEEQWFAAKPASVKIKTRPLKKLKDATL >Mature_129_residues AKIAKNVKAAPKKAVKKQTAKPATIKPIKETLSKSALVAHLAESSALAAKDVRTLLGALENTIHASLHKKGVGSFTLPGL LKISTVNVPAKPKRKGINPFTKEEQWFAAKPASVKIKTRPLKKLKDATL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13908; Mature: 13777
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIAKNVKAAPKKAVKKQTAKPATIKPIKETLSKSALVAHLAESSALAAKDVRTLLGAL CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENTIHASLHKKGVGSFTLPGLLKISTVNVPAKPKRKGINPFTKEEQWFAAKPASVKIKTR HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECC PLKKLKDATL HHHHHHCCCC >Mature Secondary Structure AKIAKNVKAAPKKAVKKQTAKPATIKPIKETLSKSALVAHLAESSALAAKDVRTLLGAL CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENTIHASLHKKGVGSFTLPGLLKISTVNVPAKPKRKGINPFTKEEQWFAAKPASVKIKTR HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECC PLKKLKDATL HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA