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The map label for this gene is bedB [H]

Identifier: 182681280

GI number: 182681280

Start: 854555

End: 854884

Strand: Reverse

Name: bedB [H]

Synonym: XfasM23_0725

Alternate gene names: 182681280

Gene position: 854884-854555 (Counterclockwise)

Preceding gene: 182681281

Following gene: 182681278

Centisome position: 33.71

GC content: 55.76

Gene sequence:

>330_bases
ATGAATGACACTTGGACCTTCGTATGCACTGACACCGAACTCCTACCCGGCGAAATGAAAACCGTCTGCGACGACATCAC
CGGCACCCCCATCGTCGTGTTCAACATTGATGGCGAACTCTACGCCCTAGAAGACCGCTGTAGCCACGAAGATTACCCAC
TGTCACCAGGCCACTTTGACCCAACCACCGGCAGCATTGAATGCCCACTCCACAGCGCCTGTTTCGACATACGAAACGGC
CAACCACTGTGCGCTCCGGCCTACACCCCAGTGATGCAATTCCCCGTCAAACGGGAACAAACCACTATCTGGACCCGTGA
CAACCGCTGA

Upstream 100 bases:

>100_bases
GCATCCCTGCATCTCCCCTGACGCCTCACCACCACGGCACCATTCCACAGCACGACAATACTTGCCCGAACACATTTGAA
AAATTTTTTGGAACCCACCC

Downstream 100 bases:

>100_bases
TCGCCCCTCCCACATCGCTGTCGATCACACCACGCATGATTCACAGCACACACAACCTCAATAGCCCACGACTAAGAGAG
CATCATGCCCAGCAAATCGC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNDTWTFVCTDTELLPGEMKTVCDDITGTPIVVFNIDGELYALEDRCSHEDYPLSPGHFDPTTGSIECPLHSACFDIRNG
QPLCAPAYTPVMQFPVKREQTTIWTRDNR

Sequences:

>Translated_109_residues
MNDTWTFVCTDTELLPGEMKTVCDDITGTPIVVFNIDGELYALEDRCSHEDYPLSPGHFDPTTGSIECPLHSACFDIRNG
QPLCAPAYTPVMQFPVKREQTTIWTRDNR
>Mature_109_residues
MNDTWTFVCTDTELLPGEMKTVCDDITGTPIVVFNIDGELYALEDRCSHEDYPLSPGHFDPTTGSIECPLHSACFDIRNG
QPLCAPAYTPVMQFPVKREQTTIWTRDNR

Specific function: This protein seems to be a 2Fe-2S ferredoxin [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=74, Percent_Identity=41.8918918918919, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 12299; Mature: 12299

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTWTFVCTDTELLPGEMKTVCDDITGTPIVVFNIDGELYALEDRCSHEDYPLSPGHFD
CCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCC
PTTGSIECPLHSACFDIRNGQPLCAPAYTPVMQFPVKREQTTIWTRDNR
CCCCEEECCCCCCEEECCCCCEEECCCCCCHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MNDTWTFVCTDTELLPGEMKTVCDDITGTPIVVFNIDGELYALEDRCSHEDYPLSPGHFD
CCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCC
PTTGSIECPLHSACFDIRNGQPLCAPAYTPVMQFPVKREQTTIWTRDNR
CCCCEEECCCCCCEEECCCCCEEECCCCCCHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8344526 [H]