| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is glmS [H]
Identifier: 182681273
GI number: 182681273
Start: 846830
End: 847870
Strand: Direct
Name: glmS [H]
Synonym: XfasM23_0718
Alternate gene names: 182681273
Gene position: 846830-847870 (Clockwise)
Preceding gene: 182681272
Following gene: 182681274
Centisome position: 33.4
GC content: 56.48
Gene sequence:
>1041_bases ATGACGTTACCGATCCCTTTGCTTGAACCAGAACAAACACTGATGTTTCGTGAGGCAGCACAGGCTGCCGCAGTGATTGC CACACAGTTCGAACGTAACGCAGCAACGATTGCCACACTGGTACGGGCATTGCGTGCTGATCCCCCTCCATTTGTGGTGA CATGCGCGCGTGGCAGTTCTGACCACGTGGCCACCTATGCCAAGTATTTGTTGGAAACGCAGTTGGGTTTGGTGACGGCT TCGGCCTCCTTGTCAGTGGGGTCAATCTATGCTGCGTCGCTACAGTTGCGTGGTGCGCTCTATCTGGTGATCTCGCAGTC AGGGAAGAGTCCGGATCTGTTGCGCAATGTGGAAGCGGCTAAGGCAGCCGGTGCACGTGTGGTGGCTTTGGTCAACGTCG AAGACTCGCCCTTGGCATCGCTGGCTGACACTGTATTGCCACTGTGCGCTGGTCCGGAGCAGAGTGTCGCTGCGACCAAA AGCTATCTGGCCTCGTTATCTGCGGTGTTGCAGTTAGTAGCAGTATGGAAGGCTGAATCGGGGTTGCTGGCGGCGTTGGA TGGTATGTCTGATGCGTTGCGCACTGCTTGGGAGTGCGATTGGACAAGCTTAATTGATGGCTTGGTCAATGCTCGCAATC TGTTCGTGCTTGGTCGTGGCTTTGGCTTGGCGACTGCTCAGGAAGCGGCACTCAAGTTCAAGGAAACCTGTGGCCTGCAT GCTGAAGCGTATAGCGCGGCGGAGGTCAAGCATGGGCCAATGGCTCTGGTGGGTTCGGGGTTCCCAGTGCTGGTGTTTGC TCAGTCGGATGGGACCGAAGCGGCGGTACGTGCATTAGCCCATGAGTTTCGAGGGCGCGGCTCCCTGGTATGGCTGGCAG CACCGGAGGGTGATTTGCCCGTTGGGGTGGCCGCACACCCGGTGTGTGCGCCTTTGTTGTCGATCCAGAGTTTTTATCGC GCCATTAATACGCTGGCATTATGCCGAGGGTATAACCCTGATCTGCCACCACATTTGAAAAAAGTCACGGAAACGGTGTG A
Upstream 100 bases:
>100_bases TGTTACAAAATCGCGGCTTTGTGCCGCAGTTAGTGGTACGCGCTTCTACCGCGCCAGTGCGACAGACACCCTTTATTAAA ACTCCCTCTCACGATCTGTC
Downstream 100 bases:
>100_bases TGGGTGTTTCTTCTGGCATCACAGGGTTCATCAATGGCCGCATTCTGACCGATACCGGGTTCCGTCATGATCTGGCGGTG TTGTTGCGTGAGGGCAGCAT
Product: glutamine--fructose-6-phosphate transaminase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTLPIPLLEPEQTLMFREAAQAAAVIATQFERNAATIATLVRALRADPPPFVVTCARGSSDHVATYAKYLLETQLGLVTA SASLSVGSIYAASLQLRGALYLVISQSGKSPDLLRNVEAAKAAGARVVALVNVEDSPLASLADTVLPLCAGPEQSVAATK SYLASLSAVLQLVAVWKAESGLLAALDGMSDALRTAWECDWTSLIDGLVNARNLFVLGRGFGLATAQEAALKFKETCGLH AEAYSAAEVKHGPMALVGSGFPVLVFAQSDGTEAAVRALAHEFRGRGSLVWLAAPEGDLPVGVAAHPVCAPLLSIQSFYR AINTLALCRGYNPDLPPHLKKVTETV
Sequences:
>Translated_346_residues MTLPIPLLEPEQTLMFREAAQAAAVIATQFERNAATIATLVRALRADPPPFVVTCARGSSDHVATYAKYLLETQLGLVTA SASLSVGSIYAASLQLRGALYLVISQSGKSPDLLRNVEAAKAAGARVVALVNVEDSPLASLADTVLPLCAGPEQSVAATK SYLASLSAVLQLVAVWKAESGLLAALDGMSDALRTAWECDWTSLIDGLVNARNLFVLGRGFGLATAQEAALKFKETCGLH AEAYSAAEVKHGPMALVGSGFPVLVFAQSDGTEAAVRALAHEFRGRGSLVWLAAPEGDLPVGVAAHPVCAPLLSIQSFYR AINTLALCRGYNPDLPPHLKKVTETV >Mature_345_residues TLPIPLLEPEQTLMFREAAQAAAVIATQFERNAATIATLVRALRADPPPFVVTCARGSSDHVATYAKYLLETQLGLVTAS ASLSVGSIYAASLQLRGALYLVISQSGKSPDLLRNVEAAKAAGARVVALVNVEDSPLASLADTVLPLCAGPEQSVAATKS YLASLSAVLQLVAVWKAESGLLAALDGMSDALRTAWECDWTSLIDGLVNARNLFVLGRGFGLATAQEAALKFKETCGLHA EAYSAAEVKHGPMALVGSGFPVLVFAQSDGTEAAVRALAHEFRGRGSLVWLAAPEGDLPVGVAAHPVCAPLLSIQSFYRA INTLALCRGYNPDLPPHLKKVTETV
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI205277386, Length=265, Percent_Identity=27.1698113207547, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI4826742, Length=335, Percent_Identity=25.9701492537313, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI1790167, Length=310, Percent_Identity=27.741935483871, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17532899, Length=270, Percent_Identity=26.2962962962963, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17532897, Length=270, Percent_Identity=26.2962962962963, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17539970, Length=270, Percent_Identity=25.9259259259259, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323731, Length=231, Percent_Identity=24.2424242424242, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI21357745, Length=303, Percent_Identity=28.7128712871287, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 36244; Mature: 36113
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPIPLLEPEQTLMFREAAQAAAVIATQFERNAATIATLVRALRADPPPFVVTCARGSS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCC DHVATYAKYLLETQLGLVTASASLSVGSIYAASLQLRGALYLVISQSGKSPDLLRNVEAA CHHHHHHHHHHHHHHHEEEECCCCCCCHHEEEHEEECCEEEEEEECCCCCHHHHHHHHHH KAAGARVVALVNVEDSPLASLADTVLPLCAGPEQSVAATKSYLASLSAVLQLVAVWKAES HCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GLLAALDGMSDALRTAWECDWTSLIDGLVNARNLFVLGRGFGLATAQEAALKFKETCGLH CCEEECCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC AEAYSAAEVKHGPMALVGSGFPVLVFAQSDGTEAAVRALAHEFRGRGSLVWLAAPEGDLP HHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCC VGVAAHPVCAPLLSIQSFYRAINTLALCRGYNPDLPPHLKKVTETV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TLPIPLLEPEQTLMFREAAQAAAVIATQFERNAATIATLVRALRADPPPFVVTCARGSS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCC DHVATYAKYLLETQLGLVTASASLSVGSIYAASLQLRGALYLVISQSGKSPDLLRNVEAA CHHHHHHHHHHHHHHHEEEECCCCCCCHHEEEHEEECCEEEEEEECCCCCHHHHHHHHHH KAAGARVVALVNVEDSPLASLADTVLPLCAGPEQSVAATKSYLASLSAVLQLVAVWKAES HCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GLLAALDGMSDALRTAWECDWTSLIDGLVNARNLFVLGRGFGLATAQEAALKFKETCGLH CCEEECCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC AEAYSAAEVKHGPMALVGSGFPVLVFAQSDGTEAAVRALAHEFRGRGSLVWLAAPEGDLP HHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCC VGVAAHPVCAPLLSIQSFYRAINTLALCRGYNPDLPPHLKKVTETV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]