BacMap

Definition	Xylella fastidiosa M23 chromosome, complete genome.
Accession	NC_010577
Length	2,535,690

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The map label for this gene is fabG [H]

Identifier: 182681266

GI number: 182681266

Start: 840341

End: 841078

Strand: Reverse

Name: fabG [H]

Synonym: XfasM23_0711

Alternate gene names: 182681266

Gene position: 841078-840341 (Counterclockwise)

Preceding gene: 182681269

Following gene: 182681258

Centisome position: 33.17

GC content: 56.64

Gene sequence:

>738_bases
ATGTCAGATCCCTCTAAAGTCGCTCTGATCACTGGTGGCGCACGTCGGATCGGCAAGGCGATCGTGCATCACCTGCATGC
ACATGGTTATCGCGTCGCCGTCCACGCACACCAGTCTGGCCACGAACTGCATGCATTTTTAACTGAGCTAGAACGCACGC
GTCCATCCATCACACTCGCATTGCTCGGAGACCTGCACGAAAACGCAGTCCCAGAAACGCTGATCGCACGCTGTGCTGGG
CATTTCGGACGGCTGGACGTGCTCATCAACAACGCCTCCAATTTCTATCCAACCCCACTGGGCGAAGTGACACCAGCACA
ATGGGATGATTTATTTGCAATCAATGCCAAGGCCCCTTTCTTCCTCGCGCAAGCAGCCACACCACTGCTGCGCAAACATC
GCGGGGCAATCATCAACCTGACAGATCTACATGGCACGCAACCACTGCGCCAACATGCTGTCTATACCGCAGCCAAAGCC
GCTCTGGAGATGTTGACTCGATCACTCGCACTGGAACTGGCACCGCAAGTTCGAGTCAATGCCATCGCACCCGGGGCGAT
CCTATGGCCAACGCAAGGCATAGCTGAAGCTGCGAAACAGGCGCTGCTGGCACGCACCCCATTAGCACGTACCGGCACAG
TGGAAGAGATCGCCGAAGCAGTGCTATGGCTACTAGAAAGTGCCAATTTCATCACCGGACATACCCTGCGCCTGGATGGC
GGCCGCACGCTGACATGA

Upstream 100 bases:

>100_bases
GCAAGGGCATCAGCACACATGTATTCAATCAAATTCAGCAATCAACTAACAACTATATAGTCTAAGCAATAAGATCAATT
TCTCCAGGGTAAAACCCCAC

Downstream 100 bases:

>100_bases
ACATGTTTACCTAAATCATGTCTCTATCGTCACCGGGTACTTCAAGATCCACGGCCTGGAAACATGCGTCGACGTGTGGA
TGCACCGCCCACAACTGCGC

Product: pteridine reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSDPSKVALITGGARRIGKAIVHHLHAHGYRVAVHAHQSGHELHAFLTELERTRPSITLALLGDLHENAVPETLIARCAG
HFGRLDVLINNASNFYPTPLGEVTPAQWDDLFAINAKAPFFLAQAATPLLRKHRGAIINLTDLHGTQPLRQHAVYTAAKA
ALEMLTRSLALELAPQVRVNAIAPGAILWPTQGIAEAAKQALLARTPLARTGTVEEIAEAVLWLLESANFITGHTLRLDG
GRTLT

Sequences:

>Translated_245_residues
MSDPSKVALITGGARRIGKAIVHHLHAHGYRVAVHAHQSGHELHAFLTELERTRPSITLALLGDLHENAVPETLIARCAG
HFGRLDVLINNASNFYPTPLGEVTPAQWDDLFAINAKAPFFLAQAATPLLRKHRGAIINLTDLHGTQPLRQHAVYTAAKA
ALEMLTRSLALELAPQVRVNAIAPGAILWPTQGIAEAAKQALLARTPLARTGTVEEIAEAVLWLLESANFITGHTLRLDG
GRTLT
>Mature_244_residues
SDPSKVALITGGARRIGKAIVHHLHAHGYRVAVHAHQSGHELHAFLTELERTRPSITLALLGDLHENAVPETLIARCAGH
FGRLDVLINNASNFYPTPLGEVTPAQWDDLFAINAKAPFFLAQAATPLLRKHRGAIINLTDLHGTQPLRQHAVYTAAKAA
LEMLTRSLALELAPQVRVNAIAPGAILWPTQGIAEAAKQALLARTPLARTGTVEEIAEAVLWLLESANFITGHTLRLDGG
RTLT

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=32.7800829875519, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=29.1338582677165, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=32.4110671936759, Blast_Score=99, Evalue=2e-21,
Organism=Homo sapiens, GI59889578, Length=209, Percent_Identity=35.4066985645933, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=32.2709163346614, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI40254992, Length=251, Percent_Identity=29.0836653386454, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=27.6422764227642, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=31.0160427807487, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI31542939, Length=191, Percent_Identity=31.9371727748691, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=27.2030651340996, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=29.6875, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI66933014, Length=209, Percent_Identity=28.2296650717703, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI40254986, Length=235, Percent_Identity=25.1063829787234, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI224922801, Length=171, Percent_Identity=30.9941520467836, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4503301, Length=222, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI126723191, Length=186, Percent_Identity=30.6451612903226, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=36.2903225806452, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=32.2448979591837, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1790717, Length=242, Percent_Identity=29.7520661157025, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1789208, Length=244, Percent_Identity=29.9180327868852, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=28.9795918367347, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=27.9352226720648, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787891, Length=248, Percent_Identity=32.6612903225806, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=28.6852589641434, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=29.5546558704453, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786812, Length=262, Percent_Identity=27.4809160305344, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787820, Length=230, Percent_Identity=25.2173913043478, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787526, Length=244, Percent_Identity=27.0491803278689, Blast_Score=64, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=32.5670498084291, Blast_Score=123, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=33.8709677419355, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=30.7692307692308, Blast_Score=118, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=30.7692307692308, Blast_Score=118, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17560676, Length=244, Percent_Identity=33.6065573770492, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=30.2238805970149, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=31.8548387096774, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=27.8195488721804, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=28.6245353159851, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=28.7313432835821, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=268, Percent_Identity=29.4776119402985, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17544670, Length=273, Percent_Identity=27.1062271062271, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=28.1853281853282, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=27.8195488721804, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=27.3076923076923, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=271, Percent_Identity=27.6752767527675, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=26.8939393939394, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17555706, Length=259, Percent_Identity=28.1853281853282, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=267, Percent_Identity=26.5917602996255, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=26.5625, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=272, Percent_Identity=28.6764705882353, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=31.6205533596838, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=26.615969581749, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=28.1124497991968, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=26.5384615384615, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=25.8426966292135, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=26.7716535433071, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=207, Percent_Identity=27.0531400966184, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=246, Percent_Identity=28.0487804878049, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323882, Length=231, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=250, Percent_Identity=27.6, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=33.0677290836653, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=31.6, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=30.8300395256917, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=34.5528455284553, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=30.4, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI21357041, Length=193, Percent_Identity=32.1243523316062, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644337, Length=171, Percent_Identity=35.0877192982456, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=26.7489711934156, Blast_Score=77, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26443; Mature: 26312

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPSKVALITGGARRIGKAIVHHLHAHGYRVAVHAHQSGHELHAFLTELERTRPSITLA
CCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
LLGDLHENAVPETLIARCAGHFGRLDVLINNASNFYPTPLGEVTPAQWDDLFAINAKAPF
EHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCC
FLAQAATPLLRKHRGAIINLTDLHGTQPLRQHAVYTAAKAALEMLTRSLALELAPQVRVN
HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
AIAPGAILWPTQGIAEAAKQALLARTPLARTGTVEEIAEAVLWLLESANFITGHTLRLDG
EECCCEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEECEEEEECC
GRTLT
CCCCC
>Mature Secondary Structure 
SDPSKVALITGGARRIGKAIVHHLHAHGYRVAVHAHQSGHELHAFLTELERTRPSITLA
CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
LLGDLHENAVPETLIARCAGHFGRLDVLINNASNFYPTPLGEVTPAQWDDLFAINAKAPF
EHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCC
FLAQAATPLLRKHRGAIINLTDLHGTQPLRQHAVYTAAKAALEMLTRSLALELAPQVRVN
HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
AIAPGAILWPTQGIAEAAKQALLARTPLARTGTVEEIAEAVLWLLESANFITGHTLRLDG
EECCCEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEECEEEEECC
GRTLT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA