| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is zraS [H]
Identifier: 182681264
GI number: 182681264
Start: 838212
End: 839681
Strand: Direct
Name: zraS [H]
Synonym: XfasM23_0709
Alternate gene names: 182681264
Gene position: 838212-839681 (Clockwise)
Preceding gene: 182681263
Following gene: 182681265
Centisome position: 33.06
GC content: 53.27
Gene sequence:
>1470_bases TTGTTGAAGATTCTGCTGATAGGGGATTCGCTAGAGGACGCCAAGTTACTGTTCAACACGTTGCGTGAGGCAGGGTTGGA TGGGAGTTTTGAGCGTGTAGAGAGCGAATCAGCGCTGCGTGAGGCGTTGTATCTTTTCGCGCCGGATATTGTGCTTTCCG ATCTGAGCATGTCTGGTTTCCACGGTTATCAAGCGTTACGCGTGGTGCGCGAGGTGGGCAATACGCCGTTTATCTTCGTC TCCAGCAAGATGGGTGAAGATATTGCAGTCGAGGCGTTGCAGGAAGGTGCTAACGACTACATCATCAAACAAAATTTGGT GCGCTTGCCAAGTGCGGTGACGCGCGCGGTCCGTGAGTCACGGGCTGAGCTAGAGCGTCAGCACGTAGAGTCGGAGTTAA TGCGTGCGCAAAGGCTGGAGAGCTTGGCGATGTTAGCGGCTGGTTTCAGTCACGACCTGCGTAATATTTTGCAGCCCTTG CTCATTGTCCCTGATCTGCTGGCGGGACGGACCGATGATCCGCAGTTGCATCAATTGGTGAGCATCGTTGCCGAGTGTGG ACGGCGTGGTCACGAGATGGCCGAATCGATTCTTTCTTTCGTGAGAGGTTCCAACAAGCCGCGTGAGCGGGTTTTATTGG CGGATCTATTCCAGACAGTGCAGTTATTGTTGCGTAGTAGCGTGCCTGATTGTATTGCTCTGCGTATTGAAGAGTGTGAT GAATATCTCAGCGTGGAGGCCAATTATACCGAGCTACAGCAGTGCTTACTTAATTTGGCCTTGAATGCGATTCATGCCAT GCCAACCGGGGGGTGCTTGACCTTGGTTGCACAGCGCCATGATGGCGACCGTATTTGTATTAGCGTGACTGACACCGGTA TCGGTATGAGTGAAGAAACCCGGGCACGGTTGTTCAGTCCATTCTTCACGACCAAGTCCGATGGTACCGGTTTGGGACTG ATTTCTTGCAAACGCATTGCTGAGAGTTATGGTGGCTTGATTCAGGTCTGCAGTGAATTGGGAGTCGGTACGCGTTTTGA TCTGATCTTGCCGGCACGTGCACCGGCTTCAAGGGTATCAGAGGAAAATGTGCCTGTAGTGCTTGGTCATGGCCAGCGTA TCTTGATCGTTGATGGAGAGGCGACGCGTCTGTCGTTGCTGGGAAATGCGTTGGCCAGTCAGGGCTATCAGCCGCAATTG GCTCCCGATGGTGGTGCGGCACTAAAACTGCTGCGTCACCATGCAGAGCCGGATTTAGTCATTATCGACAGTGACATCCT GTTATTGTCGGCGGTCTGTCTGCTCCCGACGATGCAGGAGTTGGGCTACAGGGGGCCGGCCATCGTACTTGAGGATGCTG GTCAGCCTTTGCGCCGTGAGCATTTCTCGAAGGACTTGGCGGTTCACATGTTGCGAAAACCCTTAGAGATGGGGCGTGTA TTTCGAGCCGTGGCGTATGCACTGACATAA
Upstream 100 bases:
>100_bases TGCTGTCGAGATGTTTGGCCTATATCCTGCGTGTTCGAGTGACATGCGTCCGGACACTATTTGGGAATAATCCATGTCGC AATAGGCTGAGAAACTGGGT
Downstream 100 bases:
>100_bases CGTATGACGTAGTGGGCGGAGTTTTGACAGAACACTTAGTGTGCAGCACGAGGGCAGCAATAACGCTGCATTCATGCCCA TGACGGAGGTTGACGTTGTC
Product: response regulator receiver sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLKILLIGDSLEDAKLLFNTLREAGLDGSFERVESESALREALYLFAPDIVLSDLSMSGFHGYQALRVVREVGNTPFIFV SSKMGEDIAVEALQEGANDYIIKQNLVRLPSAVTRAVRESRAELERQHVESELMRAQRLESLAMLAAGFSHDLRNILQPL LIVPDLLAGRTDDPQLHQLVSIVAECGRRGHEMAESILSFVRGSNKPRERVLLADLFQTVQLLLRSSVPDCIALRIEECD EYLSVEANYTELQQCLLNLALNAIHAMPTGGCLTLVAQRHDGDRICISVTDTGIGMSEETRARLFSPFFTTKSDGTGLGL ISCKRIAESYGGLIQVCSELGVGTRFDLILPARAPASRVSEENVPVVLGHGQRILIVDGEATRLSLLGNALASQGYQPQL APDGGAALKLLRHHAEPDLVIIDSDILLLSAVCLLPTMQELGYRGPAIVLEDAGQPLRREHFSKDLAVHMLRKPLEMGRV FRAVAYALT
Sequences:
>Translated_489_residues MLKILLIGDSLEDAKLLFNTLREAGLDGSFERVESESALREALYLFAPDIVLSDLSMSGFHGYQALRVVREVGNTPFIFV SSKMGEDIAVEALQEGANDYIIKQNLVRLPSAVTRAVRESRAELERQHVESELMRAQRLESLAMLAAGFSHDLRNILQPL LIVPDLLAGRTDDPQLHQLVSIVAECGRRGHEMAESILSFVRGSNKPRERVLLADLFQTVQLLLRSSVPDCIALRIEECD EYLSVEANYTELQQCLLNLALNAIHAMPTGGCLTLVAQRHDGDRICISVTDTGIGMSEETRARLFSPFFTTKSDGTGLGL ISCKRIAESYGGLIQVCSELGVGTRFDLILPARAPASRVSEENVPVVLGHGQRILIVDGEATRLSLLGNALASQGYQPQL APDGGAALKLLRHHAEPDLVIIDSDILLLSAVCLLPTMQELGYRGPAIVLEDAGQPLRREHFSKDLAVHMLRKPLEMGRV FRAVAYALT >Mature_489_residues MLKILLIGDSLEDAKLLFNTLREAGLDGSFERVESESALREALYLFAPDIVLSDLSMSGFHGYQALRVVREVGNTPFIFV SSKMGEDIAVEALQEGANDYIIKQNLVRLPSAVTRAVRESRAELERQHVESELMRAQRLESLAMLAAGFSHDLRNILQPL LIVPDLLAGRTDDPQLHQLVSIVAECGRRGHEMAESILSFVRGSNKPRERVLLADLFQTVQLLLRSSVPDCIALRIEECD EYLSVEANYTELQQCLLNLALNAIHAMPTGGCLTLVAQRHDGDRICISVTDTGIGMSEETRARLFSPFFTTKSDGTGLGL ISCKRIAESYGGLIQVCSELGVGTRFDLILPARAPASRVSEENVPVVLGHGQRILIVDGEATRLSLLGNALASQGYQPQL APDGGAALKLLRHHAEPDLVIIDSDILLLSAVCLLPTMQELGYRGPAIVLEDAGQPLRREHFSKDLAVHMLRKPLEMGRV FRAVAYALT
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=328, Percent_Identity=31.4024390243902, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=31.2775330396476, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI145693157, Length=248, Percent_Identity=29.8387096774194, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI48994928, Length=208, Percent_Identity=29.3269230769231, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788713, Length=251, Percent_Identity=28.6852589641434, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790300, Length=245, Percent_Identity=27.7551020408163, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87081816, Length=342, Percent_Identity=25.7309941520468, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53605; Mature: 53605
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKILLIGDSLEDAKLLFNTLREAGLDGSFERVESESALREALYLFAPDIVLSDLSMSGF CEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC HGYQALRVVREVGNTPFIFVSSKMGEDIAVEALQEGANDYIIKQNLVRLPSAVTRAVRES HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHH RAELERQHVESELMRAQRLESLAMLAAGFSHDLRNILQPLLIVPDLLAGRTDDPQLHQLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SIVAECGRRGHEMAESILSFVRGSNKPRERVLLADLFQTVQLLLRSSVPDCIALRIEECD HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EYLSVEANYTELQQCLLNLALNAIHAMPTGGCLTLVAQRHDGDRICISVTDTGIGMSEET HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHH RARLFSPFFTTKSDGTGLGLISCKRIAESYGGLIQVCSELGVGTRFDLILPARAPASRVS HHHHHCCHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEECCCCHHHCC EENVPVVLGHGQRILIVDGEATRLSLLGNALASQGYQPQLAPDGGAALKLLRHHAEPDLV CCCCCEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEE IIDSDILLLSAVCLLPTMQELGYRGPAIVLEDAGQPLRREHFSKDLAVHMLRKPLEMGRV EECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH FRAVAYALT HHHHHHHCC >Mature Secondary Structure MLKILLIGDSLEDAKLLFNTLREAGLDGSFERVESESALREALYLFAPDIVLSDLSMSGF CEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC HGYQALRVVREVGNTPFIFVSSKMGEDIAVEALQEGANDYIIKQNLVRLPSAVTRAVRES HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHH RAELERQHVESELMRAQRLESLAMLAAGFSHDLRNILQPLLIVPDLLAGRTDDPQLHQLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SIVAECGRRGHEMAESILSFVRGSNKPRERVLLADLFQTVQLLLRSSVPDCIALRIEECD HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EYLSVEANYTELQQCLLNLALNAIHAMPTGGCLTLVAQRHDGDRICISVTDTGIGMSEET HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHH RARLFSPFFTTKSDGTGLGLISCKRIAESYGGLIQVCSELGVGTRFDLILPARAPASRVS HHHHHCCHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEECCCCHHHCC EENVPVVLGHGQRILIVDGEATRLSLLGNALASQGYQPQLAPDGGAALKLLRHHAEPDLV CCCCCEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEE IIDSDILLLSAVCLLPTMQELGYRGPAIVLEDAGQPLRREHFSKDLAVHMLRKPLEMGRV EECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH FRAVAYALT HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]