| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681260
Identifier: 182681260
GI number: 182681260
Start: 832348
End: 834258
Strand: Direct
Name: 182681260
Synonym: XfasM23_0705
Alternate gene names: NA
Gene position: 832348-834258 (Clockwise)
Preceding gene: 182681259
Following gene: 182681261
Centisome position: 32.83
GC content: 53.95
Gene sequence:
>1911_bases ATGATGCGTTTGTTGTTTTTTCTGCTATTGAGTCCTATTTGCATTGTTACAGTTGCTGATGCCAGGAATGCGCCTGCTGC TGCTCAAACGGACGGTAACTTCAGCTATCTGCGTTACCGTGCTGATTACGCAGTGCGGGCTGATGCGAGTAGCGTGCAGA CCAATGAATACGATATCCGGCTCAACACCCAAGCGGCGGTAGAGCAGTTTAGCCAAGTGCGTCTTGGCTATAGCGAGAAG ATGCAGAAGTTGGAGATCTTGGAAGCGTATACGATTACTGCTGCCGGAATCCGCCAGGATGTGGCTCCGACAAAGATTTA CACCCAGGAGAGCTATTCCAGCGCTTCAGCGGCGATGTACGCTGACTATAAGGTTAAAGTTGTGGTATTCCCCAATTTGG CACCGGGGGCGCGCGTGGTGTATCGCCTCCGGCGGACTCAGCTCACCCCTTACTTCCCAGGCTATTTCGGATTTTGGGAG ACATTCAGTGTATTTACCCGGTATGACGATGCAGTGGTGACATTACGTGCGCCGCGCAAGCTGTCGATGCACGTCTGGGT ACGTGGGGTGCATGGGTTCACCCGACCGCGTTTTCAGGGTGACCAGGCTCGCTGGGAGTGGCGTTACCGGCGTAGTGTGC CGTTGCAGAGTCAGACGTGGAGTGCGGCCCAATGGGAATTTAGTCCGACGATCATGGTGAGCACCTTCAAGGATTGGTCA CAGTTGGGTCATGCTTATCATGTCAAAGCAGGTAAAGCGGCCGTGGTCACTCCGCGGGTGCGTGTTTTGGCCGATCAGAT CACTGCTGGTAGTGCCGGGCGTCGAGCACAGGCCACTGCACTGTACAACTGGGTAGCGCGTAACATCCGCTATGTTGCGG TCTATCTTGGTAACGGTGGTTTAGAGCCAAACAGGGCTGATGTCATCCTCGAACAGCATTACGGTGATTGCAAAGATCAT GCAGTCATTCTTGAGGCGTTGCTCGCAGCCAAAGGTATTCAAAGTACACCTGTTCTGATTGGTGCTGATGGTGGACCGAC ACTGCCACCGATTGCGGTACTCGGTCGTTTCAACCATGCCATCAACTATGTGCCCGAGTTTAATCTTTACCTTGATTCGA CAAATCCTTACGCGCGCTTTGGTCAGCTTCCGGCCAGTGACCTTGGGGTACCGGTCGTGCATAGCGCTGACGGTTATGTG ACTCGTACACCTCCCCATGATGTATGGGCCAACACTTACGTGGCCCGCACTGAATACCGCTTTGCCCAGGATGGTAGTTT GAGTGGAGAGACCATGCTGGATCTGGGGTCGGATGGGGAAATTGCGACACGCGCAATGTTTGTCGAGCTTAATGCGCAGA ATCGGCGACGCATTGAGGAGAGCATCCTGGCTCAGTCCGGTTTTGATGGCGATGGGATGTTGGAGTTGCTGGGGATGCCG CAGGATCTACAGTCTCCATTCAGTTACCGCTATCGGTTCTTGGCGCGCGATTATGTTGATTTTTCGATGGCCGGAGGGTT TGCGTTGCCTTACATGCCAGGCGCCGAGTCAGTGCGCAACATCTATACCACTACGCCCGCTGAGACCAACCAGACGCCGT TTTATTGCAACGAAAGTTTGCATGAGGAGACGTATGTACTGCGCTTTCCGGCGAACGTTCCGATTATTGCGATTCCTGGG AGTCACCGTTTTCGCAATCGTGCCGGGGAGTACAGCGTGGATTGGTATCGCGACGGGCAGACAATCACGGCCATGCACCG ATTACGTCATCTAGCGTTGCGTGGTCCTGAGAAGCTCTGTTTACCGGGAGATTATCAGGCGTTCCGTCAGCTTTACCAAC AGGTAAGACGTGGCTTTCGTGAGCAGGTCCTGTACGGTGATTTGCGGCGCATAGAGACCGTAGCGCATTGA
Upstream 100 bases:
>100_bases GTGTCACCCTTCGCGAGATTTTTTATGAGCATCTTTCAGTCGGTGTTGATCTCATCTGAGTGGCAGCCCCGACCCTACCG TTTGAATTGGATCGCCCATC
Downstream 100 bases:
>100_bases TGGTTGATTCCAGGGTCCAGAATTAGCTAGAAATTTACGCGTTGCTGGTGTACGGAGGGGAGATATGAATGCTGACTTGA GTCTCTGTGGAGAGTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MMRLLFFLLLSPICIVTVADARNAPAAAQTDGNFSYLRYRADYAVRADASSVQTNEYDIRLNTQAAVEQFSQVRLGYSEK MQKLEILEAYTITAAGIRQDVAPTKIYTQESYSSASAAMYADYKVKVVVFPNLAPGARVVYRLRRTQLTPYFPGYFGFWE TFSVFTRYDDAVVTLRAPRKLSMHVWVRGVHGFTRPRFQGDQARWEWRYRRSVPLQSQTWSAAQWEFSPTIMVSTFKDWS QLGHAYHVKAGKAAVVTPRVRVLADQITAGSAGRRAQATALYNWVARNIRYVAVYLGNGGLEPNRADVILEQHYGDCKDH AVILEALLAAKGIQSTPVLIGADGGPTLPPIAVLGRFNHAINYVPEFNLYLDSTNPYARFGQLPASDLGVPVVHSADGYV TRTPPHDVWANTYVARTEYRFAQDGSLSGETMLDLGSDGEIATRAMFVELNAQNRRRIEESILAQSGFDGDGMLELLGMP QDLQSPFSYRYRFLARDYVDFSMAGGFALPYMPGAESVRNIYTTTPAETNQTPFYCNESLHEETYVLRFPANVPIIAIPG SHRFRNRAGEYSVDWYRDGQTITAMHRLRHLALRGPEKLCLPGDYQAFRQLYQQVRRGFREQVLYGDLRRIETVAH
Sequences:
>Translated_636_residues MMRLLFFLLLSPICIVTVADARNAPAAAQTDGNFSYLRYRADYAVRADASSVQTNEYDIRLNTQAAVEQFSQVRLGYSEK MQKLEILEAYTITAAGIRQDVAPTKIYTQESYSSASAAMYADYKVKVVVFPNLAPGARVVYRLRRTQLTPYFPGYFGFWE TFSVFTRYDDAVVTLRAPRKLSMHVWVRGVHGFTRPRFQGDQARWEWRYRRSVPLQSQTWSAAQWEFSPTIMVSTFKDWS QLGHAYHVKAGKAAVVTPRVRVLADQITAGSAGRRAQATALYNWVARNIRYVAVYLGNGGLEPNRADVILEQHYGDCKDH AVILEALLAAKGIQSTPVLIGADGGPTLPPIAVLGRFNHAINYVPEFNLYLDSTNPYARFGQLPASDLGVPVVHSADGYV TRTPPHDVWANTYVARTEYRFAQDGSLSGETMLDLGSDGEIATRAMFVELNAQNRRRIEESILAQSGFDGDGMLELLGMP QDLQSPFSYRYRFLARDYVDFSMAGGFALPYMPGAESVRNIYTTTPAETNQTPFYCNESLHEETYVLRFPANVPIIAIPG SHRFRNRAGEYSVDWYRDGQTITAMHRLRHLALRGPEKLCLPGDYQAFRQLYQQVRRGFREQVLYGDLRRIETVAH >Mature_636_residues MMRLLFFLLLSPICIVTVADARNAPAAAQTDGNFSYLRYRADYAVRADASSVQTNEYDIRLNTQAAVEQFSQVRLGYSEK MQKLEILEAYTITAAGIRQDVAPTKIYTQESYSSASAAMYADYKVKVVVFPNLAPGARVVYRLRRTQLTPYFPGYFGFWE TFSVFTRYDDAVVTLRAPRKLSMHVWVRGVHGFTRPRFQGDQARWEWRYRRSVPLQSQTWSAAQWEFSPTIMVSTFKDWS QLGHAYHVKAGKAAVVTPRVRVLADQITAGSAGRRAQATALYNWVARNIRYVAVYLGNGGLEPNRADVILEQHYGDCKDH AVILEALLAAKGIQSTPVLIGADGGPTLPPIAVLGRFNHAINYVPEFNLYLDSTNPYARFGQLPASDLGVPVVHSADGYV TRTPPHDVWANTYVARTEYRFAQDGSLSGETMLDLGSDGEIATRAMFVELNAQNRRRIEESILAQSGFDGDGMLELLGMP QDLQSPFSYRYRFLARDYVDFSMAGGFALPYMPGAESVRNIYTTTPAETNQTPFYCNESLHEETYVLRFPANVPIIAIPG SHRFRNRAGEYSVDWYRDGQTITAMHRLRHLALRGPEKLCLPGDYQAFRQLYQQVRRGFREQVLYGDLRRIETVAH
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71829; Mature: 71829
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLLFFLLLSPICIVTVADARNAPAAAQTDGNFSYLRYRADYAVRADASSVQTNEYDIR CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEE LNTQAAVEQFSQVRLGYSEKMQKLEILEAYTITAAGIRQDVAPTKIYTQESYSSASAAMY ECCHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEHHHHHCCCCCCEEEECCCCCCCCEEEE ADYKVKVVVFPNLAPGARVVYRLRRTQLTPYFPGYFGFWETFSVFTRYDDAVVTLRAPRK ECEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCE LSMHVWVRGVHGFTRPRFQGDQARWEWRYRRSVPLQSQTWSAAQWEFSPTIMVSTFKDWS EEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEEHHHHH QLGHAYHVKAGKAAVVTPRVRVLADQITAGSAGRRAQATALYNWVARNIRYVAVYLGNGG HCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCC LEPNRADVILEQHYGDCKDHAVILEALLAAKGIQSTPVLIGADGGPTLPPIAVLGRFNHA CCCCHHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHH INYVPEFNLYLDSTNPYARFGQLPASDLGVPVVHSADGYVTRTPPHDVWANTYVARTEYR HCCCCCEEEEEECCCCHHHHCCCCCHHCCCCEEECCCCCEECCCCCCHHCCCEEEECEEE FAQDGSLSGETMLDLGSDGEIATRAMFVELNAQNRRRIEESILAQSGFDGDGMLELLGMP ECCCCCCCCCEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEECCCC QDLQSPFSYRYRFLARDYVDFSMAGGFALPYMPGAESVRNIYTTTPAETNQTPFYCNESL HHHCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHEEECCCCCCCCCCEEECCCC HEETYVLRFPANVPIIAIPGSHRFRNRAGEYSVDWYRDGQTITAMHRLRHLALRGPEKLC CCCEEEEEECCCCCEEEECCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEE LPGDYQAFRQLYQQVRRGFREQVLYGDLRRIETVAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMRLLFFLLLSPICIVTVADARNAPAAAQTDGNFSYLRYRADYAVRADASSVQTNEYDIR CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEE LNTQAAVEQFSQVRLGYSEKMQKLEILEAYTITAAGIRQDVAPTKIYTQESYSSASAAMY ECCHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEHHHHHCCCCCCEEEECCCCCCCCEEEE ADYKVKVVVFPNLAPGARVVYRLRRTQLTPYFPGYFGFWETFSVFTRYDDAVVTLRAPRK ECEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCE LSMHVWVRGVHGFTRPRFQGDQARWEWRYRRSVPLQSQTWSAAQWEFSPTIMVSTFKDWS EEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEEHHHHH QLGHAYHVKAGKAAVVTPRVRVLADQITAGSAGRRAQATALYNWVARNIRYVAVYLGNGG HCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCC LEPNRADVILEQHYGDCKDHAVILEALLAAKGIQSTPVLIGADGGPTLPPIAVLGRFNHA CCCCHHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHH INYVPEFNLYLDSTNPYARFGQLPASDLGVPVVHSADGYVTRTPPHDVWANTYVARTEYR HCCCCCEEEEEECCCCHHHHCCCCCHHCCCCEEECCCCCEECCCCCCHHCCCEEEECEEE FAQDGSLSGETMLDLGSDGEIATRAMFVELNAQNRRRIEESILAQSGFDGDGMLELLGMP ECCCCCCCCCEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEECCCC QDLQSPFSYRYRFLARDYVDFSMAGGFALPYMPGAESVRNIYTTTPAETNQTPFYCNESL HHHCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHEEECCCCCCCCCCEEECCCC HEETYVLRFPANVPIIAIPGSHRFRNRAGEYSVDWYRDGQTITAMHRLRHLALRGPEKLC CCCEEEEEECCCCCEEEECCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEE LPGDYQAFRQLYQQVRRGFREQVLYGDLRRIETVAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA