| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681257
Identifier: 182681257
GI number: 182681257
Start: 827011
End: 828147
Strand: Reverse
Name: 182681257
Synonym: XfasM23_0702
Alternate gene names: NA
Gene position: 828147-827011 (Counterclockwise)
Preceding gene: 182681258
Following gene: 182681256
Centisome position: 32.66
GC content: 54.0
Gene sequence:
>1137_bases ATGATGAACTTGGAGGTACGTTGGCTAAATGCGCTGGACGAGATTGCAGCCGATATCTGGGATTCTCTGCACGATGGCAG CAATCCCTTCCTAACGCATGCTTTCCTATCAGGCCTAGAGCAGTATGGCTGTCTACGTCCATCCTGGGGTTGGAAGCCAC TACACCTTACCCTATGGGACAACAGCACCCTGGTCGCCGCCGCACCTGGCTATCTGAAGTACAACTCGCACGGTGAGTTT GTGTTTGATCACGCATGGGCACAGGCCTATGCACTCCAAAGACAAGCCTACTACCCGAAGTGGTTGTGCGGCATCCCTTA CTCTCCAGTCACTGGTCCTCGCTTATTAGCACTCGATACGGCGAAACGTCAGGCGCTACTCACAGCAGTAAAGGCTAGAG TAACGCAAGACAATCTTTCCTCGGCGCATATAAACTTTCATACTGATGAAGAGGAAATCACATTTGGTACCACCGATGAC GGTTGGCTGGCCCGAAGCGACGTGCAGTACCATTGGTGCAATATTGCAGGCTGGCCGGATTTCGATACATTTCTAGCCAC AATGGACCATAAACACCGCAAAAACATCCGACAGGAGCGCGCAAAAGTCGCCCGCTCTGGGGTGCGCATCCAATCCATCC ATGGCGACGAAGCAACCCCTATCGAACTGAAAGCGATGCATCACTTCTATGTGAACACCTTTCACCAGTACGGCAACGCA CCCGCCTTGACACTACCATTTCTCACACACCTGGCAAAGACCATACCGCGGCAACTGGTGCTGTTCATGGCCACACTTAA CGGCAAGCTGATCGGCGGCTCACTATGCCTACGCAGTGCAAAGACGCTGTACGGCCGCCACTGGGGCGGCGCAGCATTAC CGGGGCTGCACTTCGAGACTTGCTACTACCAAGGCATTGATTACTGCCTACGCGAGGGTCTGACCCGCTTCGAGCCAGGC GCTCAAGGTAAACACAAGATCGCGCGCGGATTCCTACCAACCGAAGTGCGTAGCAGACACTGGATCTCTGATCCCCGCTT CCGAATACCATTGGCGCACTGGTGTGCCACGGAACGCATCGCAATCACAGCCCATATGCACGAACTGATTGCACATTCAC CATTCCGTAAAGACTGA
Upstream 100 bases:
>100_bases CCATCATTAGCATGTTTTTTTCGTTCATCAATCTAATCACGCTGGGTATCAACTTCTACAACAACGGCATCGAAACAATG TAGTCCACTACAGGAACATG
Downstream 100 bases:
>100_bases ACCGAACACGCGTGCATTCCCAACCCTATCTGCTCTCTCCCACACCAAATACACCATTCCCACCGGCGGAACACGCCCTG CACGAACCCAATGGGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MMNLEVRWLNALDEIAADIWDSLHDGSNPFLTHAFLSGLEQYGCLRPSWGWKPLHLTLWDNSTLVAAAPGYLKYNSHGEF VFDHAWAQAYALQRQAYYPKWLCGIPYSPVTGPRLLALDTAKRQALLTAVKARVTQDNLSSAHINFHTDEEEITFGTTDD GWLARSDVQYHWCNIAGWPDFDTFLATMDHKHRKNIRQERAKVARSGVRIQSIHGDEATPIELKAMHHFYVNTFHQYGNA PALTLPFLTHLAKTIPRQLVLFMATLNGKLIGGSLCLRSAKTLYGRHWGGAALPGLHFETCYYQGIDYCLREGLTRFEPG AQGKHKIARGFLPTEVRSRHWISDPRFRIPLAHWCATERIAITAHMHELIAHSPFRKD
Sequences:
>Translated_378_residues MMNLEVRWLNALDEIAADIWDSLHDGSNPFLTHAFLSGLEQYGCLRPSWGWKPLHLTLWDNSTLVAAAPGYLKYNSHGEF VFDHAWAQAYALQRQAYYPKWLCGIPYSPVTGPRLLALDTAKRQALLTAVKARVTQDNLSSAHINFHTDEEEITFGTTDD GWLARSDVQYHWCNIAGWPDFDTFLATMDHKHRKNIRQERAKVARSGVRIQSIHGDEATPIELKAMHHFYVNTFHQYGNA PALTLPFLTHLAKTIPRQLVLFMATLNGKLIGGSLCLRSAKTLYGRHWGGAALPGLHFETCYYQGIDYCLREGLTRFEPG AQGKHKIARGFLPTEVRSRHWISDPRFRIPLAHWCATERIAITAHMHELIAHSPFRKD >Mature_378_residues MMNLEVRWLNALDEIAADIWDSLHDGSNPFLTHAFLSGLEQYGCLRPSWGWKPLHLTLWDNSTLVAAAPGYLKYNSHGEF VFDHAWAQAYALQRQAYYPKWLCGIPYSPVTGPRLLALDTAKRQALLTAVKARVTQDNLSSAHINFHTDEEEITFGTTDD GWLARSDVQYHWCNIAGWPDFDTFLATMDHKHRKNIRQERAKVARSGVRIQSIHGDEATPIELKAMHHFYVNTFHQYGNA PALTLPFLTHLAKTIPRQLVLFMATLNGKLIGGSLCLRSAKTLYGRHWGGAALPGLHFETCYYQGIDYCLREGLTRFEPG AQGKHKIARGFLPTEVRSRHWISDPRFRIPLAHWCATERIAITAHMHELIAHSPFRKD
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43049; Mature: 43049
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNLEVRWLNALDEIAADIWDSLHDGSNPFLTHAFLSGLEQYGCLRPSWGWKPLHLTLWD CCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC NSTLVAAAPGYLKYNSHGEFVFDHAWAQAYALQRQAYYPKWLCGIPYSPVTGPRLLALDT CCEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECH AKRQALLTAVKARVTQDNLSSAHINFHTDEEEITFGTTDDGWLARSDVQYHWCNIAGWPD HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCEEECCCEEEEEEECCCCC FDTFLATMDHKHRKNIRQERAKVARSGVRIQSIHGDEATPIELKAMHHFYVNTFHQYGNA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCC PALTLPFLTHLAKTIPRQLVLFMATLNGKLIGGSLCLRSAKTLYGRHWGGAALPGLHFET CEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHH CYYQGIDYCLREGLTRFEPGAQGKHKIARGFLPTEVRSRHWISDPRFRIPLAHWCATERI HHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCEECCHHHHHCCCCE AITAHMHELIAHSPFRKD EEHHHHHHHHHCCCCCCC >Mature Secondary Structure MMNLEVRWLNALDEIAADIWDSLHDGSNPFLTHAFLSGLEQYGCLRPSWGWKPLHLTLWD CCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC NSTLVAAAPGYLKYNSHGEFVFDHAWAQAYALQRQAYYPKWLCGIPYSPVTGPRLLALDT CCEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECH AKRQALLTAVKARVTQDNLSSAHINFHTDEEEITFGTTDDGWLARSDVQYHWCNIAGWPD HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCEEECCCEEEEEEECCCCC FDTFLATMDHKHRKNIRQERAKVARSGVRIQSIHGDEATPIELKAMHHFYVNTFHQYGNA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCC PALTLPFLTHLAKTIPRQLVLFMATLNGKLIGGSLCLRSAKTLYGRHWGGAALPGLHFET CEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHH CYYQGIDYCLREGLTRFEPGAQGKHKIARGFLPTEVRSRHWISDPRFRIPLAHWCATERI HHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCEECCHHHHHCCCCE AITAHMHELIAHSPFRKD EEHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA