Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

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The map label for this gene is yfcB [C]

Identifier: 182681193

GI number: 182681193

Start: 753039

End: 753965

Strand: Direct

Name: yfcB [C]

Synonym: XfasM23_0637

Alternate gene names: 182681193

Gene position: 753039-753965 (Clockwise)

Preceding gene: 182681187

Following gene: 182681194

Centisome position: 29.7

GC content: 54.8

Gene sequence:

>927_bases
ATGACTCCTGCTGCGGCCGATGAACTTCACACGATCGTTGACTTAATCCGCTACGGTGCTAGCCGTTTCAGTGAGGCTGG
CTTGACCTTTGGTCACAGTTACGACAATGCGTTGGACGAGGCGACGCAACTGGTGTTGCATGCCTTGCATCTGCCGCCGG
ATCTTGGCCCCGCCTATGGTCAGGCGCGTTTATTGCGTACTGAGAAGGAATGTGTTCTGGCGCTATTTGAGCGACGCGTG
ACCGAGCGTGTGCCGGTTGCGTATTTGACGGGTGATGCTTGGTTTGCCGGGCTGAACTTTAAGAGCGATGCACGCGCACT
GGTGCCACGCTCGCCGATTGCCGAGTTAATTCAGGCTGGTTTTGAGCCGTGGTTGGCAGGGCGTGACGTGCGTCATGCTC
TGGACTTATGCACCGGCTCCGGGTGCATTGCGATTGCGATGGGTCACTACAACCCTCATTGGCGTGTGGATGGGTCTGAC
ATCAGTGAGGATGCGCTGTCGTTAGCATTGGAAAATAAGGTGCGACTGTTGGCGCATAACGTCGAGTTGATCAAGTCTGA
TGTGTTTGCTGGACTGGTTGGACGCCGTTACCAGTTGATTGTCAGCAATCCGCCTTATGTGACTGACGCCGAAACCGATG
CACTGCCGCAGGAGTATGGTTACGAGCCAGAGCTGGGTTTGCGTGCTGGCCCGGATGGACTGAATTTGGTGCTGAAGATT
TTGCGTGATGCTCCGGCTCATTTGGATGAGGAGGGCCTGTTGATCTGCGAGGTTGGCGAGTCTGAGCAACAGTTGGTACA
GCTGTTGCCGCAGGTTGATTTTGCTTGGGTTGAATTCAAAGTCGGGCAAATGGGGGTCTTTGCGGTTGAATGCCGTGAGT
TGATTGCTCATCATGACCGTATTGCTGCGCTTGCCGCTGAACGTTAA

Upstream 100 bases:

>100_bases
CGGTGCTACGGTTGAACATGGTGGTTCCCACTGCAACGGATGCTCAATCGTAGCGCGGTTCCCTCTATAATCGTCGCCCG
ACCTGATTTTGGCTGTTGCT

Downstream 100 bases:

>100_bases
GGTGCTTGTTCATGGGGGCGAACACGTTTGGAAAGTTACTGGCTGTCACGACCTTCGGCGAATCGCATGGCCCTGCCATT
GGCTGTGTGATTGATGGCTG

Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTPAAADELHTIVDLIRYGASRFSEAGLTFGHSYDNALDEATQLVLHALHLPPDLGPAYGQARLLRTEKECVLALFERRV
TERVPVAYLTGDAWFAGLNFKSDARALVPRSPIAELIQAGFEPWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSD
ISEDALSLALENKVRLLAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEYGYEPELGLRAGPDGLNLVLKI
LRDAPAHLDEEGLLICEVGESEQQLVQLLPQVDFAWVEFKVGQMGVFAVECRELIAHHDRIAALAAER

Sequences:

>Translated_308_residues
MTPAAADELHTIVDLIRYGASRFSEAGLTFGHSYDNALDEATQLVLHALHLPPDLGPAYGQARLLRTEKECVLALFERRV
TERVPVAYLTGDAWFAGLNFKSDARALVPRSPIAELIQAGFEPWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSD
ISEDALSLALENKVRLLAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEYGYEPELGLRAGPDGLNLVLKI
LRDAPAHLDEEGLLICEVGESEQQLVQLLPQVDFAWVEFKVGQMGVFAVECRELIAHHDRIAALAAER
>Mature_307_residues
TPAAADELHTIVDLIRYGASRFSEAGLTFGHSYDNALDEATQLVLHALHLPPDLGPAYGQARLLRTEKECVLALFERRVT
ERVPVAYLTGDAWFAGLNFKSDARALVPRSPIAELIQAGFEPWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDI
SEDALSLALENKVRLLAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEYGYEPELGLRAGPDGLNLVLKIL
RDAPAHLDEEGLLICEVGESEQQLVQLLPQVDFAWVEFKVGQMGVFAVECRELIAHHDRIAALAAER

Specific function: Unknown

COG id: COG2890

COG function: function code J; Methylase of polypeptide chain release factors

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705409, Length=276, Percent_Identity=28.6231884057971, Blast_Score=75, Evalue=7e-14,
Organism=Escherichia coli, GI87082085, Length=299, Percent_Identity=48.8294314381271, Blast_Score=264, Evalue=6e-72,
Organism=Escherichia coli, GI1787463, Length=210, Percent_Identity=30, Blast_Score=88, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24582226, Length=214, Percent_Identity=27.5700934579439, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR004556
- InterPro:   IPR017127
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 33864; Mature: 33733

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAAADELHTIVDLIRYGASRFSEAGLTFGHSYDNALDEATQLVLHALHLPPDLGPAYG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
QARLLRTEKECVLALFERRVTERVPVAYLTGDAWFAGLNFKSDARALVPRSPIAELIQAG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHCC
FEPWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDISEDALSLALENKVRLLAHN
CCHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
VELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEYGYEPELGLRAGPDGLNLVLKI
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
LRDAPAHLDEEGLLICEVGESEQQLVQLLPQVDFAWVEFKVGQMGVFAVECRELIAHHDR
HHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
IAALAAER
HHHHHCCC
>Mature Secondary Structure 
TPAAADELHTIVDLIRYGASRFSEAGLTFGHSYDNALDEATQLVLHALHLPPDLGPAYG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
QARLLRTEKECVLALFERRVTERVPVAYLTGDAWFAGLNFKSDARALVPRSPIAELIQAG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHCC
FEPWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDISEDALSLALENKVRLLAHN
CCHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
VELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEYGYEPELGLRAGPDGLNLVLKI
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
LRDAPAHLDEEGLLICEVGESEQQLVQLLPQVDFAWVEFKVGQMGVFAVECRELIAHHDR
HHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
IAALAAER
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]