Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681123
Identifier: 182681123
GI number: 182681123
Start: 674046
End: 674486
Strand: Direct
Name: 182681123
Synonym: XfasM23_0565
Alternate gene names: NA
Gene position: 674046-674486 (Clockwise)
Preceding gene: 182681119
Following gene: 182681124
Centisome position: 26.58
GC content: 54.2
Gene sequence:
>441_bases GTGTGCTGTTTGCTACACATTTTTGCACGCCATTCAGGTTCGTTCAGTGAAGGTCTTGCTATTCCTGGTAGGCTCGGCGG CGGAATTCCAATTGAAGTCGCCCTATTTCGGGTCAGGACAGGAACTTCCGGAGTCGCGACCATGAAACTGAAGTACCTAG TGATGCTCATGCTGGTCCCCGCTGTTGTGGGAGTCGCCGTGCCAAGTGCTCTGGCTCAAGCCCCCAAGGCATCGTCGACC GCTACTGAAATGCAACAGCCAGCCTCTCCTTCTACCGACATGCCTACTAATTCCGAGGGGCAGGGTATGGGTGAGCACAC GGGTGAGCACAAAGTAAGAAAAAGCAAGAAGCATCGTTCTCATTCTGCTAAGCCCATGAGCACTGGCAGTGCTACTGCGC CCACGAAGGAAGCAGAAGAGAACACCTCTGCTACCCGTTGA
Upstream 100 bases:
>100_bases GGCGGCGTTTGACTGGGTCCAGGCCAGTGAGAACTTCGATGTCTGCGGCGTTATAGCGGGAGTTCATGCGTCTTTTGGGG TGGCGTGAGGTAACGTCTAA
Downstream 100 bases:
>100_bases TCTAGTTGTTTAGTTACTGCGTTGACGCCCCGGATGATCCCGGGGCGTCTTTAGTTTTGTGCCCCAATACATTTGTCGTT CTTAGTGGTGATGCTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MCCLLHIFARHSGSFSEGLAIPGRLGGGIPIEVALFRVRTGTSGVATMKLKYLVMLMLVPAVVGVAVPSALAQAPKASST ATEMQQPASPSTDMPTNSEGQGMGEHTGEHKVRKSKKHRSHSAKPMSTGSATAPTKEAEENTSATR
Sequences:
>Translated_146_residues MCCLLHIFARHSGSFSEGLAIPGRLGGGIPIEVALFRVRTGTSGVATMKLKYLVMLMLVPAVVGVAVPSALAQAPKASST ATEMQQPASPSTDMPTNSEGQGMGEHTGEHKVRKSKKHRSHSAKPMSTGSATAPTKEAEENTSATR >Mature_146_residues MCCLLHIFARHSGSFSEGLAIPGRLGGGIPIEVALFRVRTGTSGVATMKLKYLVMLMLVPAVVGVAVPSALAQAPKASST ATEMQQPASPSTDMPTNSEGQGMGEHTGEHKVRKSKKHRSHSAKPMSTGSATAPTKEAEENTSATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15228; Mature: 15228
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCLLHIFARHSGSFSEGLAIPGRLGGGIPIEVALFRVRTGTSGVATMKLKYLVMLMLVP CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH AVVGVAVPSALAQAPKASSTATEMQQPASPSTDMPTNSEGQGMGEHTGEHKVRKSKKHRS HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH HSAKPMSTGSATAPTKEAEENTSATR CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCCLLHIFARHSGSFSEGLAIPGRLGGGIPIEVALFRVRTGTSGVATMKLKYLVMLMLVP CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH AVVGVAVPSALAQAPKASSTATEMQQPASPSTDMPTNSEGQGMGEHTGEHKVRKSKKHRS HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH HSAKPMSTGSATAPTKEAEENTSATR CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA