Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is 182681118

Identifier: 182681118

GI number: 182681118

Start: 665073

End: 665363

Strand: Reverse

Name: 182681118

Synonym: XfasM23_0560

Alternate gene names: NA

Gene position: 665363-665073 (Counterclockwise)

Preceding gene: 182681120

Following gene: 182681116

Centisome position: 26.24

GC content: 55.33

Gene sequence:

>291_bases
ATGGGTGATGGTCATGACTTCTCTCGGTTCTGCGGTGTGGTACAGAGGCTGCAGGCTGCGGGGCGATGCTTGGGGAGATG
TGAGGCACTGGCTGGTACGTTAGGGATGGTTAGGTCGCTAGAGTGGCTGTGTGTTGCTGGCGGCAACGGGATACGAATCA
TGCGCAGGGGGGATGGGCTTGCGTGCGGTGAGTTACGTCGTTTGCAGTGCAGGAAAATAACGAAAAAACTCGGTGGATGT
TTGCTGATCAATGCATCGGCTCTCAAAACGAAGACTGCGGTGTTGCGTTGA

Upstream 100 bases:

>100_bases
TTTTTGCACATGCCGTTTGTCAGTCACTCCTTTAGACATCATGCGTGGCTCTTTGTCTGTTTAGTTGAAGTGCATCGCTT
GTTTTAGGTAGCGGTACTTG

Downstream 100 bases:

>100_bases
TGGGCAGTATAGATTTCAGTCTTCTGTATGCGATTTGTTGCTCTTTGGGGTGCTTGGTGACGGATTGCGGGTTTTCTTCT
CATTGCGTAGTTCATGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MGDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGLACGELRRLQCRKITKKLGGC
LLINASALKTKTAVLR

Sequences:

>Translated_96_residues
MGDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGLACGELRRLQCRKITKKLGGC
LLINASALKTKTAVLR
>Mature_95_residues
GDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGLACGELRRLQCRKITKKLGGCL
LINASALKTKTAVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10305; Mature: 10174

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC
ACGELRRLQCRKITKKLGGCLLINASALKTKTAVLR
CHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCC
>Mature Secondary Structure 
GDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC
ACGELRRLQCRKITKKLGGCLLINASALKTKTAVLR
CHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA