Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681117
Identifier: 182681117
GI number: 182681117
Start: 664551
End: 665057
Strand: Direct
Name: 182681117
Synonym: XfasM23_0559
Alternate gene names: NA
Gene position: 664551-665057 (Clockwise)
Preceding gene: 182681109
Following gene: 182681119
Centisome position: 26.21
GC content: 49.31
Gene sequence:
>507_bases ATGATCCCTACCAATCACCACAATGAACACGCCTCACGTAAAGACCCAAACGAACAGACAAATGACCATGACAACGAAGA GTTCACCCAACGCTTAGGCAAATCTGCAGAGCGGGTCTGGCTTGCGGGGATCGGCGCCCTCGGCCGTGTCCAATCAGAAG GTGCGCGTTTCTTTGAAGCACTTGTCAATGAAGGCGAAGAAATAAAGCAACGCAGACGTGAAAGTAGCCTTCACAGTGCA GAAAGCATCCGTGAACACGTCGAAGTCAAATTAGAAGAAACATGGGAAAACACGCAACGCAACTGGCGGCGGATGAACCA GCTATTCGATGAACGGATACAAGACATCTTGCATACCCTCAAGATACCAACCCGTGAGGAGATCGAAGCATTGCGCCACG AGATCGAGATACTGCGTAATGAACTACATGAACTACGCAATGAGAAGAAAACCCGCAATCCGTCACCAAGCACCCCAAAG AGCAACAAATCGCATACAGAAGACTGA
Upstream 100 bases:
>100_bases CAATGCATTACATGGCACTTGACATATGCCGTAATAGAATGCAATCCAAAAACGTGTATCGAGTATCCTGTTTCGTATTA CAGATTTGAGGAGAGCCGCA
Downstream 100 bases:
>100_bases AATCTATACTGCCCATCAACGCAACACCGCAGTCTTCGTTTTGAGAGCCGATGCATTGATCAGCAAACATCCACCGAGTT TTTTCGTTATTTTCCTGCAC
Product: poly(hydroxyalkanoate) granule-associated protein
Products: NA
Alternate protein names: Poly(Hydroxyalcanoate) Granule Associated Protein; Polyhydroxyalcanoate_granule_associated_protein; Polyhydroxyalkanoate Synthesis Protein PhaF; Protein Associated With Polyhydroxyalkanoate Inclusion; Polygranule-Associated Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIPTNHHNEHASRKDPNEQTNDHDNEEFTQRLGKSAERVWLAGIGALGRVQSEGARFFEALVNEGEEIKQRRRESSLHSA ESIREHVEVKLEETWENTQRNWRRMNQLFDERIQDILHTLKIPTREEIEALRHEIEILRNELHELRNEKKTRNPSPSTPK SNKSHTED
Sequences:
>Translated_168_residues MIPTNHHNEHASRKDPNEQTNDHDNEEFTQRLGKSAERVWLAGIGALGRVQSEGARFFEALVNEGEEIKQRRRESSLHSA ESIREHVEVKLEETWENTQRNWRRMNQLFDERIQDILHTLKIPTREEIEALRHEIEILRNELHELRNEKKTRNPSPSTPK SNKSHTED >Mature_168_residues MIPTNHHNEHASRKDPNEQTNDHDNEEFTQRLGKSAERVWLAGIGALGRVQSEGARFFEALVNEGEEIKQRRRESSLHSA ESIREHVEVKLEETWENTQRNWRRMNQLFDERIQDILHTLKIPTREEIEALRHEIEILRNELHELRNEKKTRNPSPSTPK SNKSHTED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19882; Mature: 19882
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTNHHNEHASRKDPNEQTNDHDNEEFTQRLGKSAERVWLAGIGALGRVQSEGARFFEA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNEGEEIKQRRRESSLHSAESIREHVEVKLEETWENTQRNWRRMNQLFDERIQDILHTL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIPTREEIEALRHEIEILRNELHELRNEKKTRNPSPSTPKSNKSHTED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPTNHHNEHASRKDPNEQTNDHDNEEFTQRLGKSAERVWLAGIGALGRVQSEGARFFEA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNEGEEIKQRRRESSLHSAESIREHVEVKLEETWENTQRNWRRMNQLFDERIQDILHTL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIPTREEIEALRHEIEILRNELHELRNEKKTRNPSPSTPKSNKSHTED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA