Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is mutX [H]
Identifier: 182681109
GI number: 182681109
Start: 653931
End: 654419
Strand: Direct
Name: mutX [H]
Synonym: XfasM23_0551
Alternate gene names: 182681109
Gene position: 653931-654419 (Clockwise)
Preceding gene: 182681108
Following gene: 182681117
Centisome position: 25.79
GC content: 52.76
Gene sequence:
>489_bases ATGGCTTATACCCCGATCATTGCCACGCTCGGTTATGTGCTTTCACCGGACCAATGCCGTGTGTTGATGATTCACCGTAA TGCGCGTTCTGGAGATGCGCACCTGGGCAAGTACAACGGTCTAGGTGGCAAGGTCGAACCGGGTGAGGATGTTCTGGCTG GCATGCGCCGTGAGTTATATGAGGAAGCAGGGATTGACTGCCTTTCAATCCGTTTGCGAGGCACGATCAGTTGGCCGGGC TTTGGCAAACAGGGGGATGATTGGTTTGGTTTTGTGTTTGTGATTGATGCGTTTCAGGGAGAACCCAAAACACACAATGC TGAAGGTGTTTTGGAATGGGTCGAGCGCCAACGTTTATTCGAATTGCCCATGTGGGAGGGGGATGCCAAGTTCCTACCGC TGGTGTTTGACGATGATCCGCGTCCATTCCATGGGGTGATGCCGTATTGTGAGGGGCGTATGCAGTCTTGGTCGTTTTCC CGTCTTTAG
Upstream 100 bases:
>100_bases TCACATCGTGTGTGCCGCCTGATGCGCGGCTAAGACGTAAGACGACGGCTTTTGTGAAAGCAGGCATACTCGCCTCACTC TCTTGCTGTTGAATGTACAT
Downstream 100 bases:
>100_bases GGGGTATGGGGTATGACCTGAGTATGTTTGATGAGATAGACAATGCTTGTTGTTCGTGATGAATGTGTTGGCATTGCATC TTGTTTGCCTCATGGGTGCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: 7,8-dihydro-8-oxoguanine-triphosphatase; 8-oxo-dGTPase; dGTP pyrophosphohydrolase [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAYTPIIATLGYVLSPDQCRVLMIHRNARSGDAHLGKYNGLGGKVEPGEDVLAGMRRELYEEAGIDCLSIRLRGTISWPG FGKQGDDWFGFVFVIDAFQGEPKTHNAEGVLEWVERQRLFELPMWEGDAKFLPLVFDDDPRPFHGVMPYCEGRMQSWSFS RL
Sequences:
>Translated_162_residues MAYTPIIATLGYVLSPDQCRVLMIHRNARSGDAHLGKYNGLGGKVEPGEDVLAGMRRELYEEAGIDCLSIRLRGTISWPG FGKQGDDWFGFVFVIDAFQGEPKTHNAEGVLEWVERQRLFELPMWEGDAKFLPLVFDDDPRPFHGVMPYCEGRMQSWSFS RL >Mature_161_residues AYTPIIATLGYVLSPDQCRVLMIHRNARSGDAHLGKYNGLGGKVEPGEDVLAGMRRELYEEAGIDCLSIRLRGTISWPGF GKQGDDWFGFVFVIDAFQGEPKTHNAEGVLEWVERQRLFELPMWEGDAKFLPLVFDDDPRPFHGVMPYCEGRMQSWSFSR L
Specific function: Involved in the DNA repair system to avoid A.T to G.C transversions. Degrades 8-oxo-dGTP to the monophosphate, but is also active on all of the nucleoside triphosphates [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003562 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 18385; Mature: 18254
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTPIIATLGYVLSPDQCRVLMIHRNARSGDAHLGKYNGLGGKVEPGEDVLAGMRRELY CCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH EEAGIDCLSIRLRGTISWPGFGKQGDDWFGFVFVIDAFQGEPKTHNAEGVLEWVERQRLF HHHCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH ELPMWEGDAKFLPLVFDDDPRPFHGVMPYCEGRMQSWSFSRL CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AYTPIIATLGYVLSPDQCRVLMIHRNARSGDAHLGKYNGLGGKVEPGEDVLAGMRRELY CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH EEAGIDCLSIRLRGTISWPGFGKQGDDWFGFVFVIDAFQGEPKTHNAEGVLEWVERQRLF HHHCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH ELPMWEGDAKFLPLVFDDDPRPFHGVMPYCEGRMQSWSFSRL CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12397186 [H]