Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681098
Identifier: 182681098
GI number: 182681098
Start: 638722
End: 639618
Strand: Direct
Name: 182681098
Synonym: XfasM23_0540
Alternate gene names: NA
Gene position: 638722-639618 (Clockwise)
Preceding gene: 182681093
Following gene: 182681099
Centisome position: 25.19
GC content: 47.6
Gene sequence:
>897_bases ATGATGAAGGACGCAATGAGTATAGTTAAGAAGAAAACAATCAGAATGCTGTTTCCTCAATGGCAAGGTGGAAATCAGGA GCTATATGGTTTGGGCGCACGTCTTCTGGCTTGGTTGGCGCCGGAAACAGAGGCGCCTATGTTTGAGGTGAATGTGCCTG AGTTTAAAAAAGAAACGCCCGAACCGGAGAGAGGGGTTATCTACAGGCAGCAATTATTCAAGCAGTATGATGAAGCTTAT CGACTGTTGGAGCGGGAAGATCCGGATTATGTGGTGATCTTTGGTGGTGATTGCCTGGTGGATTTGGCGCCTTTTGCTTG GTTGAATGAGAAACATCATGGTCAGTTGGGTGTGTTATGGATTGATGCTCATCCTGATATAAAAACACCACAGGATTCTA TAAATGGTCACACGATGGTTCTGGGAAGTTTGCTGGGTGAAGGTGATAACGAATTTGCCGCAAAGGTGAAAGTTCCGCTG AAGCCGTCCAGGGTGATGTTTGCAGGGTTGATTGAAACGGGGTTGACGGAGCAGGAGACTGAGGTAATTCATCGCCTTGG ACTCAATGTGGCCAAACCGGAGGTGTTATTTGACAACAGCCAGACGGTGATTGATTGGGTCCGTAAGGAGAAAATCGAGA AGTTGGTGATTCATTTCGATCTGGACGTTCTTCATCCTGATGTATTCCGCTCGTTGTTATTTGCCGAGCCGGAGCCGGAA TTCGATTGGCGGGCAACTTACCCGGTTGGGCAATTGCGTTTGGCACAGGTGATCAGGTTGATTCGCGATGTTGCCGCTGA AACGGAGTTGGTGGCTATTGGCATAACTGAGCATCTTCCTTGGGATGTTTGGCACTTGAAGGAGTCTTTAAGTAAGGTTC CATTGCTGAATCGGTAA
Upstream 100 bases:
>100_bases AATGATTTTAGATTAATTTTTTATTCTCAGCGTTCAATGAAGTATTCAATGGTAGATTCATTGTGTGTTGGTATACATAA CGATTGTGAAATAGGTAGGT
Downstream 100 bases:
>100_bases GAGCAAAACGATCAGGGATAAAAGTTGGTGTCATTAGTCTATCGGCACCGGCTTTTGTCAGGCACCTTTAGGTAATTAGG TACTTAGATTGCTTAGATAG
Product: arginase/agmatinase/formiminoglutamase family protein
Products: NA
Alternate protein names: Arginase/Agmatinase/Formiminoglutamase; Arginase/Agmatinase/Formimionoglutamate Hydrolase; Arginase/Agmatinase/Formiminoglutamase Family Protein
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MMKDAMSIVKKKTIRMLFPQWQGGNQELYGLGARLLAWLAPETEAPMFEVNVPEFKKETPEPERGVIYRQQLFKQYDEAY RLLEREDPDYVVIFGGDCLVDLAPFAWLNEKHHGQLGVLWIDAHPDIKTPQDSINGHTMVLGSLLGEGDNEFAAKVKVPL KPSRVMFAGLIETGLTEQETEVIHRLGLNVAKPEVLFDNSQTVIDWVRKEKIEKLVIHFDLDVLHPDVFRSLLFAEPEPE FDWRATYPVGQLRLAQVIRLIRDVAAETELVAIGITEHLPWDVWHLKESLSKVPLLNR
Sequences:
>Translated_298_residues MMKDAMSIVKKKTIRMLFPQWQGGNQELYGLGARLLAWLAPETEAPMFEVNVPEFKKETPEPERGVIYRQQLFKQYDEAY RLLEREDPDYVVIFGGDCLVDLAPFAWLNEKHHGQLGVLWIDAHPDIKTPQDSINGHTMVLGSLLGEGDNEFAAKVKVPL KPSRVMFAGLIETGLTEQETEVIHRLGLNVAKPEVLFDNSQTVIDWVRKEKIEKLVIHFDLDVLHPDVFRSLLFAEPEPE FDWRATYPVGQLRLAQVIRLIRDVAAETELVAIGITEHLPWDVWHLKESLSKVPLLNR >Mature_298_residues MMKDAMSIVKKKTIRMLFPQWQGGNQELYGLGARLLAWLAPETEAPMFEVNVPEFKKETPEPERGVIYRQQLFKQYDEAY RLLEREDPDYVVIFGGDCLVDLAPFAWLNEKHHGQLGVLWIDAHPDIKTPQDSINGHTMVLGSLLGEGDNEFAAKVKVPL KPSRVMFAGLIETGLTEQETEVIHRLGLNVAKPEVLFDNSQTVIDWVRKEKIEKLVIHFDLDVLHPDVFRSLLFAEPEPE FDWRATYPVGQLRLAQVIRLIRDVAAETELVAIGITEHLPWDVWHLKESLSKVPLLNR
Specific function: Unknown
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34151; Mature: 34151
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00148 ARGINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKDAMSIVKKKTIRMLFPQWQGGNQELYGLGARLLAWLAPETEAPMFEVNVPEFKKETP CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCC EPERGVIYRQQLFKQYDEAYRLLEREDPDYVVIFGGDCLVDLAPFAWLNEKHHGQLGVLW CCHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCHHHHCCCCCCCCEEEEE IDAHPDIKTPQDSINGHTMVLGSLLGEGDNEFAAKVKVPLKPSRVMFAGLIETGLTEQET EECCCCCCCCHHHCCCHHEEHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHH EVIHRLGLNVAKPEVLFDNSQTVIDWVRKEKIEKLVIHFDLDVLHPDVFRSLLFAEPEPE HHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHEEHEECHHHCCHHHHHHHHHCCCCCC FDWRATYPVGQLRLAQVIRLIRDVAAETELVAIGITEHLPWDVWHLKESLSKVPLLNR CCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMKDAMSIVKKKTIRMLFPQWQGGNQELYGLGARLLAWLAPETEAPMFEVNVPEFKKETP CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCC EPERGVIYRQQLFKQYDEAYRLLEREDPDYVVIFGGDCLVDLAPFAWLNEKHHGQLGVLW CCHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCHHHHCCCCCCCCEEEEE IDAHPDIKTPQDSINGHTMVLGSLLGEGDNEFAAKVKVPLKPSRVMFAGLIETGLTEQET EECCCCCCCCHHHCCCHHEEHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHH EVIHRLGLNVAKPEVLFDNSQTVIDWVRKEKIEKLVIHFDLDVLHPDVFRSLLFAEPEPE HHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHEEHEECHHHCCHHHHHHHHHCCCCCC FDWRATYPVGQLRLAQVIRLIRDVAAETELVAIGITEHLPWDVWHLKESLSKVPLLNR CCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA