Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681097
Identifier: 182681097
GI number: 182681097
Start: 637384
End: 638031
Strand: Reverse
Name: 182681097
Synonym: XfasM23_0539
Alternate gene names: NA
Gene position: 638031-637384 (Counterclockwise)
Preceding gene: 182681100
Following gene: 182681096
Centisome position: 25.16
GC content: 49.69
Gene sequence:
>648_bases ATGGTCGCCAATCCGGCTCACCTCAAAGATGGCGGCATCTTTTTAGATGGCTGGAAAACAGGACAACCCGACAAACAGGC CGCCGCCTTCGTGTACTACCCTGGGGAAACAGGCAGAGTGTATGCGGCTTATTACAACGGACGCCAAATATTCCATTTTG GTGTCAACGCTTCCCAAATCCACCCCGCCATCCAAGTGTGGACAAAACGGTTCTTACCGCCCTCGGCGGTGATATCCCAC GCCAAAGAGCGTAGCGCTGCGGACCCCCGCTCCTTGATGAAGCGTCGCACCATGTCAAATGAGCCTTCTCCGGAAGAACA GGACAAATTGCGTCAATTGGCCGCCACCATCTGGCAACCCTGGATCGTCAACTATTGGGATATGAACGCCACCGTTGGGA ATATTCTAGCCACGGTGACGGGAGAAATTTTGAAATGCTCAATAGCCTACAGCTTCGTACCTCAGCAAATACTAAACCCT TTTCTTAAACCGCTCTGGAAAGACAGATGGAAACTTGTAGTTCAATATTTCGCGCAAATCATTTGGGAAAATTATAAAAT ATCGCAGAACCAACGCTATCAATCATGTATATACGTTGCTGCGGCAAACTGGCGAAGCCCGATTGAAATGGCTTCCGCAG GGATCTAA
Upstream 100 bases:
>100_bases ACCGACACTATTTCAAGAAATTATCCTTGAAGCAGGCATTGAAAATGATTTAAGGCAAATTCTTGGAGAACATTTCGACA CATTCAAAAACAATTTTGAA
Downstream 100 bases:
>100_bases GCAGACTCCCTCTTGCTAGCATGGTCATGGAGGTCGCTCTCTTTGTCAGCATTGGAAGCCGAAAGCAACTCATCATTGAT TTGTCTCCGAGTGTGATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MVANPAHLKDGGIFLDGWKTGQPDKQAAAFVYYPGETGRVYAAYYNGRQIFHFGVNASQIHPAIQVWTKRFLPPSAVISH AKERSAADPRSLMKRRTMSNEPSPEEQDKLRQLAATIWQPWIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILNP FLKPLWKDRWKLVVQYFAQIIWENYKISQNQRYQSCIYVAAANWRSPIEMASAGI
Sequences:
>Translated_215_residues MVANPAHLKDGGIFLDGWKTGQPDKQAAAFVYYPGETGRVYAAYYNGRQIFHFGVNASQIHPAIQVWTKRFLPPSAVISH AKERSAADPRSLMKRRTMSNEPSPEEQDKLRQLAATIWQPWIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILNP FLKPLWKDRWKLVVQYFAQIIWENYKISQNQRYQSCIYVAAANWRSPIEMASAGI >Mature_215_residues MVANPAHLKDGGIFLDGWKTGQPDKQAAAFVYYPGETGRVYAAYYNGRQIFHFGVNASQIHPAIQVWTKRFLPPSAVISH AKERSAADPRSLMKRRTMSNEPSPEEQDKLRQLAATIWQPWIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILNP FLKPLWKDRWKLVVQYFAQIIWENYKISQNQRYQSCIYVAAANWRSPIEMASAGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24553; Mature: 24553
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVANPAHLKDGGIFLDGWKTGQPDKQAAAFVYYPGETGRVYAAYYNGRQIFHFGVNASQI CCCCCCEECCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCEEEEEECCCHHHH HPAIQVWTKRFLPPSAVISHAKERSAADPRSLMKRRTMSNEPSPEEQDKLRQLAATIWQP HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC WIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILNPFLKPLWKDRWKLVVQYFAQI HHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWENYKISQNQRYQSCIYVAAANWRSPIEMASAGI HHCCCCCCCCCCHHHEEEEEECCCCCHHHHHHCCC >Mature Secondary Structure MVANPAHLKDGGIFLDGWKTGQPDKQAAAFVYYPGETGRVYAAYYNGRQIFHFGVNASQI CCCCCCEECCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCEEEEEECCCHHHH HPAIQVWTKRFLPPSAVISHAKERSAADPRSLMKRRTMSNEPSPEEQDKLRQLAATIWQP HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC WIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILNPFLKPLWKDRWKLVVQYFAQI HHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWENYKISQNQRYQSCIYVAAANWRSPIEMASAGI HHCCCCCCCCCCHHHEEEEEECCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA