Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681076
Identifier: 182681076
GI number: 182681076
Start: 624992
End: 625321
Strand: Reverse
Name: 182681076
Synonym: XfasM23_0518
Alternate gene names: NA
Gene position: 625321-624992 (Counterclockwise)
Preceding gene: 182681077
Following gene: 182681075
Centisome position: 24.66
GC content: 32.73
Gene sequence:
>330_bases ATGCGTTTTATTCAGGCTGTGTATTCAAGATATCATTCGATTCGGTCTTTTTTTTATTTTCCGATTGTTAGGCGGTTCTT TAATCTTCTCTTGTCGTTTTTTTTGTCGATTCTGTTGTTTATTTGTTTATCCTTATTAATTCTTGTTCAACCGACTTCTG GTTTTCAGGATTATTTTGCTCATTCTGTATCTCATTCTTTATCTTCGTTTGTTCCTTTTTTGTGTTCTTGTGTTTTTGTG TTCTCTGTTGTTTATTTTATTTTAAGGCTTGTGTTTTTTCTCGATTTTTTGTTGCTGTTGTTCTTGAATCGCATTGATCG CTGCGGTTGA
Upstream 100 bases:
>100_bases TTGGCTGGGTCTTAATCCCCATATCCTTCGCTTTTTTTGTCTATTACGTTATTCAAAACATTCATAATCAAGTATAGTTT TCTTGGGTGAATTTTTGATG
Downstream 100 bases:
>100_bases TGCTTTCTATAGTTTTTTATGTGGAGGTATTTTATGTCTCGTCGCTCTTCTTCTTCTGATTCTGCGGTTTATGTTAATTT TTTGGAGCGTGAGCGTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MRFIQAVYSRYHSIRSFFYFPIVRRFFNLLLSFFLSILLFICLSLLILVQPTSGFQDYFAHSVSHSLSSFVPFLCSCVFV FSVVYFILRLVFFLDFLLLLFLNRIDRCG
Sequences:
>Translated_109_residues MRFIQAVYSRYHSIRSFFYFPIVRRFFNLLLSFFLSILLFICLSLLILVQPTSGFQDYFAHSVSHSLSSFVPFLCSCVFV FSVVYFILRLVFFLDFLLLLFLNRIDRCG >Mature_109_residues MRFIQAVYSRYHSIRSFFYFPIVRRFFNLLLSFFLSILLFICLSLLILVQPTSGFQDYFAHSVSHSLSSFVPFLCSCVFV FSVVYFILRLVFFLDFLLLLFLNRIDRCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12968; Mature: 12968
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFIQAVYSRYHSIRSFFYFPIVRRFFNLLLSFFLSILLFICLSLLILVQPTSGFQDYFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH HSVSHSLSSFVPFLCSCVFVFSVVYFILRLVFFLDFLLLLFLNRIDRCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFIQAVYSRYHSIRSFFYFPIVRRFFNLLLSFFLSILLFICLSLLILVQPTSGFQDYFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH HSVSHSLSSFVPFLCSCVFVFSVVYFILRLVFFLDFLLLLFLNRIDRCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA