Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681069
Identifier: 182681069
GI number: 182681069
Start: 619129
End: 619545
Strand: Reverse
Name: 182681069
Synonym: XfasM23_0509
Alternate gene names: NA
Gene position: 619545-619129 (Counterclockwise)
Preceding gene: 182681070
Following gene: 182681064
Centisome position: 24.43
GC content: 40.29
Gene sequence:
>417_bases ATGAATTTTAGAATTGTCTCTTTTTTATTCATTTTTTTTAGTTTATTTGTTTCTTGTCGTGTTTTTGCCGATCAGTTAGT TCATAAATGTTTGTATAAAAGACGCGTTTCTTATCAGTCTGAACCTTGTTCTTCTGGGGTTGAAGTGAGAACTTGGCAAG CTGTTCCTGATTCCCCTCCTAGTAGTGACGAGCTTTTGCGTCGTTATCAGGTCGATCAAGAATTGCAACAACGTTATGCT AACGATCGTTTGCAGCGTAGTGTTTCTCACACTCTTGGTTCATCTATTCCTGTGCAAAAATCATCTTGCGATGCTGCAAG AAGACAGCGTGCTGTTATTTTGGATCAGATGGGCGTTAATCGCTCCTACGAGGCTACTGCTGCCGTAGATAATGCTGTTA ATGCTGCTTGTAGATGA
Upstream 100 bases:
>100_bases ATAAAGTTGTTGCTGTTTTTTATATCTGTAGGTTTTTCTTGTAATAAAAGTATGCATATGCTCATGATTAGCAATCTTGT GTCTTTTATGAGATGAGCTT
Downstream 100 bases:
>100_bases ATACATAGCTTCTACGCTGTTTATTCAGTGGAATAGCTTGATGAACAATGTTGCTGCTGTAGCTCCTGCTGCAATGAGGC TGCTTCCAACTACCACGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNFRIVSFLFIFFSLFVSCRVFADQLVHKCLYKRRVSYQSEPCSSGVEVRTWQAVPDSPPSSDELLRRYQVDQELQQRYA NDRLQRSVSHTLGSSIPVQKSSCDAARRQRAVILDQMGVNRSYEATAAVDNAVNAACR
Sequences:
>Translated_138_residues MNFRIVSFLFIFFSLFVSCRVFADQLVHKCLYKRRVSYQSEPCSSGVEVRTWQAVPDSPPSSDELLRRYQVDQELQQRYA NDRLQRSVSHTLGSSIPVQKSSCDAARRQRAVILDQMGVNRSYEATAAVDNAVNAACR >Mature_138_residues MNFRIVSFLFIFFSLFVSCRVFADQLVHKCLYKRRVSYQSEPCSSGVEVRTWQAVPDSPPSSDELLRRYQVDQELQQRYA NDRLQRSVSHTLGSSIPVQKSSCDAARRQRAVILDQMGVNRSYEATAAVDNAVNAACR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15741; Mature: 15741
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFRIVSFLFIFFSLFVSCRVFADQLVHKCLYKRRVSYQSEPCSSGVEVRTWQAVPDSPP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC SSDELLRRYQVDQELQQRYANDRLQRSVSHTLGSSIPVQKSSCDAARRQRAVILDQMGVN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC RSYEATAAVDNAVNAACR CCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNFRIVSFLFIFFSLFVSCRVFADQLVHKCLYKRRVSYQSEPCSSGVEVRTWQAVPDSPP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC SSDELLRRYQVDQELQQRYANDRLQRSVSHTLGSSIPVQKSSCDAARRQRAVILDQMGVN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC RSYEATAAVDNAVNAACR CCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA