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The map label for this gene is ytsP [H]

Identifier: 182681064

GI number: 182681064

Start: 609275

End: 609757

Strand: Reverse

Name: ytsP [H]

Synonym: XfasM23_0503

Alternate gene names: 182681064

Gene position: 609757-609275 (Counterclockwise)

Preceding gene: 182681069

Following gene: 182681063

Centisome position: 24.05

GC content: 53.42

Gene sequence:

>483_bases
ATGCTGGCTCCTTTCATACTCACCGGGAATAAGCCAGAGCAGTACGCGCAACTTGAGGCCCAGGCCAAAGCACTGATACA
TGGTGAGACCGACAGGATTGCGAATGCCGCTAATCTTGCAGCACTCATCTTTCATAGTCTGCCTGGGCTGAATTGGGTCG
GCTTCTATTTCTACGATGGGCGTGAATTGGTCGTTGGTCCATTTCAAGGATTACCCGCTTGTATACGCATCCCACTGGAC
AAAGGTGTCTGTGGTGCTGCTGCACGTACGCAGCGCACGCAACGGATTGACGACGTGGACACATTCCCTGATCACATCGC
TTGCGACTCGGCCTCACGCTCTGAACTGGTGGTGCCATTACTCAAAGACAACACCCTGATCGGTGTGCTGGATCTGGACA
GTCCAACATGTGCTCGCTTCGATAGTGACGACCAGACGGGGATTGAATCGCTGGCGCGCGTGTTCGTTAGCAATTTAAGG
TGA

Upstream 100 bases:

>100_bases
ATTTGAATCGGTGCTTCGGGCTTTATAACTCATGAAGATTGACATACATAAAAATAAAGCTTCGGCACATGCCCATCACA
CATTCCAATAGGCTTTGCTG

Downstream 100 bases:

>100_bases
AAGTGGTTGCCATCTATGGCACAACATCGCTCCAAAGAGCACGCCCTAGTTTCGTCAAGTCGACCTATCCGCATCTTTGT
TAACATCCGCCATGTTGACT

Product: putative GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFYDGRELVVGPFQGLPACIRIPLD
KGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVVPLLKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSNLR

Sequences:

>Translated_160_residues
MLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFYDGRELVVGPFQGLPACIRIPLD
KGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVVPLLKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSNLR
>Mature_160_residues
MLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFYDGRELVVGPFQGLPACIRIPLD
KGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVVPLLKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSNLR

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=142, Percent_Identity=49.2957746478873, Blast_Score=148, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6322781, Length=153, Percent_Identity=40.5228758169935, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17428; Mature: 17428

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFYDG
CCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
RELVVGPFQGLPACIRIPLDKGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVVPL
CEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEE
LKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSNLR
ECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFYDG
CCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
RELVVGPFQGLPACIRIPLDKGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVVPL
CEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEE
LKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSNLR
ECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]