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The map label for this gene is yadH [H]

Identifier: 182681056

GI number: 182681056

Start: 597477

End: 598256

Strand: Reverse

Name: yadH [H]

Synonym: XfasM23_0495

Alternate gene names: 182681056

Gene position: 598256-597477 (Counterclockwise)

Preceding gene: 182681057

Following gene: 182681047

Centisome position: 23.59

GC content: 50.64

Gene sequence:

>780_bases
GTGACAAACACACCAAGCAACACTCAGCGCAACCTGACCGCTCTAAGTACCATTGTCCGCCGTGAAGTGCGGCGCATATT
ACGCATCTGGAGCCAAACATTGGTGCCACCAGCCATTACGATGGGCTTGTATTTTTTAATTTTTGGCAAGTTGATCGGTA
CACGCGTAGGCCAAATGGATGGCTTCGACTATATGCACTTCATCGTACCGGGCTTAGTCATGATGAGTGTGATCCAGAAC
AGTTACGGTAACATCAGTTCTTCGTTCTTCGGCGCCAAGTTCGGCCGACACGTCGAGGAGCTTCTGGTGAGTCCAATGCC
AAATTGGGTGATTCTATGGGGCTACGTCGCAGGAGCAGTGCTACGAGGGGTGATGGTCGGCGCCATCGTGATGGTCATCG
CGATGTACTTTACTCCGGTGCGACTACCTTACCCACTAGTGACATTAAGCACAGCTGTACTGGGGGCAATCATCTTCTCA
CTGGCCGGCTTCATTAACGCTACCTACGCCAAAAATTTCGACGACATCGCGATCATACCGACGTTCGTTCTAACTCCATT
GAGCTATCTCGGAGGCGTATTTTACTCAGTGAAGCTGCTACCAGGCTGGGCAGAGGCCGCCACTTATGCGAACCCAATCT
TTTACATGGTCAATGCCTTCCGCTACGGCTTGCTTGGCCATAGCGACGTACCATTGTGGAAAGCATATGCACTCATGCTG
ACATTCATTGCTGGACTCAGTGCATTATCGTTGTGGTTGCTAAGACGGGAAATAGATTAG

Upstream 100 bases:

>100_bases
ATACGTTTGACCAGCACGTAGAACCGCAACATCGCTGCAAGCATGCCAACGTACGCAACCATACCCTAATTATATTCCAC
TACCGCATGCGATCCTTACC

Downstream 100 bases:

>100_bases
GAATGCAAGTTTACAAGCCTGTCGGATCGATTGTTTGGTACTAAGCCTGGATCTGGATTCTATGGAACTTAATACTCACC
GCATGTTTAAACACAAAACA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTNTPSNTQRNLTALSTIVRREVRRILRIWSQTLVPPAITMGLYFLIFGKLIGTRVGQMDGFDYMHFIVPGLVMMSVIQN
SYGNISSSFFGAKFGRHVEELLVSPMPNWVILWGYVAGAVLRGVMVGAIVMVIAMYFTPVRLPYPLVTLSTAVLGAIIFS
LAGFINATYAKNFDDIAIIPTFVLTPLSYLGGVFYSVKLLPGWAEAATYANPIFYMVNAFRYGLLGHSDVPLWKAYALML
TFIAGLSALSLWLLRREID

Sequences:

>Translated_259_residues
MTNTPSNTQRNLTALSTIVRREVRRILRIWSQTLVPPAITMGLYFLIFGKLIGTRVGQMDGFDYMHFIVPGLVMMSVIQN
SYGNISSSFFGAKFGRHVEELLVSPMPNWVILWGYVAGAVLRGVMVGAIVMVIAMYFTPVRLPYPLVTLSTAVLGAIIFS
LAGFINATYAKNFDDIAIIPTFVLTPLSYLGGVFYSVKLLPGWAEAATYANPIFYMVNAFRYGLLGHSDVPLWKAYALML
TFIAGLSALSLWLLRREID
>Mature_258_residues
TNTPSNTQRNLTALSTIVRREVRRILRIWSQTLVPPAITMGLYFLIFGKLIGTRVGQMDGFDYMHFIVPGLVMMSVIQNS
YGNISSSFFGAKFGRHVEELLVSPMPNWVILWGYVAGAVLRGVMVGAIVMVIAMYFTPVRLPYPLVTLSTAVLGAIIFSL
AGFINATYAKNFDDIAIIPTFVLTPLSYLGGVFYSVKLLPGWAEAATYANPIFYMVNAFRYGLLGHSDVPLWKAYALMLT
FIAGLSALSLWLLRREID

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=243, Percent_Identity=54.320987654321, Blast_Score=272, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28768; Mature: 28636

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNTPSNTQRNLTALSTIVRREVRRILRIWSQTLVPPAITMGLYFLIFGKLIGTRVGQMD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
GFDYMHFIVPGLVMMSVIQNSYGNISSSFFGAKFGRHVEELLVSPMPNWVILWGYVAGAV
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LRGVMVGAIVMVIAMYFTPVRLPYPLVTLSTAVLGAIIFSLAGFINATYAKNFDDIAIIP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TFVLTPLSYLGGVFYSVKLLPGWAEAATYANPIFYMVNAFRYGLLGHSDVPLWKAYALML
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TFIAGLSALSLWLLRREID
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]