| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681051
Identifier: 182681051
GI number: 182681051
Start: 592979
End: 593233
Strand: Direct
Name: 182681051
Synonym: XfasM23_0490
Alternate gene names: NA
Gene position: 592979-593233 (Clockwise)
Preceding gene: 182681050
Following gene: 182681052
Centisome position: 23.39
GC content: 39.22
Gene sequence:
>255_bases ATGGGAATTGATAAAGTGCGTGAGTTGACAGTACGGGAAATCGAAAGTGTTGATGGCGGCGTTTATTTTTTAAATCTTAA TTATAGATCTTTGGGTGGTTTGATTAGAACTCCTATGCTGACATTTTTTGGAATCGGAAATACAGCGATTGCTGTAAATT TTGGTCGGGGATCTTCCTTTTACATCAAGCCGACACTCAATATCGACACTGTGAATGCTACAAGCATCACCCAGGAAATA AATCAAGGGACTTGA
Upstream 100 bases:
>100_bases GCGAGCAATATTTATTAATAATTAACGTTAATTTTATTTACTTCTAATCTTGTTATTCGCATAATGCAGTCTCTTGAATT AAATTATATTGGAATAAATT
Downstream 100 bases:
>100_bases ATATTCCCGGTGCTATTTTGCAGCAGTTCTTACTAAATCTGAGGAAGGATGAGGAATCATTAAGGGAGGGGGGATTCGGA ATGATTGAAACAAACGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MGIDKVRELTVREIESVDGGVYFLNLNYRSLGGLIRTPMLTFFGIGNTAIAVNFGRGSSFYIKPTLNIDTVNATSITQEI NQGT
Sequences:
>Translated_84_residues MGIDKVRELTVREIESVDGGVYFLNLNYRSLGGLIRTPMLTFFGIGNTAIAVNFGRGSSFYIKPTLNIDTVNATSITQEI NQGT >Mature_83_residues GIDKVRELTVREIESVDGGVYFLNLNYRSLGGLIRTPMLTFFGIGNTAIAVNFGRGSSFYIKPTLNIDTVNATSITQEIN QGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9189; Mature: 9057
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIDKVRELTVREIESVDGGVYFLNLNYRSLGGLIRTPMLTFFGIGNTAIAVNFGRGSSF CCHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCHHHCCCEEEEECCCEEEEEECCCCCEE YIKPTLNIDTVNATSITQEINQGT EEEECCCEECCCHHHHHHHHCCCC >Mature Secondary Structure GIDKVRELTVREIESVDGGVYFLNLNYRSLGGLIRTPMLTFFGIGNTAIAVNFGRGSSF CHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCHHHCCCEEEEECCCEEEEEECCCCCEE YIKPTLNIDTVNATSITQEINQGT EEEECCCEECCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA