| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is cls [H]
Identifier: 182681044
GI number: 182681044
Start: 584490
End: 585893
Strand: Direct
Name: cls [H]
Synonym: XfasM23_0483
Alternate gene names: 182681044
Gene position: 584490-585893 (Clockwise)
Preceding gene: 182681043
Following gene: 182681045
Centisome position: 23.05
GC content: 53.63
Gene sequence:
>1404_bases ATGGAAGGGACTTGGCTGTTTGCATTGGATTGGGTGATCCGTTTGGTTGCGTTGCTTTGGATCCCAGCACGAACCACCCC TAGTGCTGCGCGCAGCTGGTTGTTACTGATTGGTTTCGTCCCTGTGTTTGGCTTGCCACTTTACTTGGTGTTTGGCCATC CTTGGCTGTCACGTAAGCGTGTGTTGCGTCAGGCGTTGGCTTCTCATGTGATCCGTGAGTGGCAGCGTGGGTTGGGTGCA TTGCGCTGGCAGCCTCAGGAGAATGGCGTCGCTGCGGAATTGGTACCTTTGGTGGAGCATCAGGGCGATTTTATGCCAAC ACGTGGTAACGCCTTGGATCTATTGGATGATTACCAAGCTTCGCTGCATTTGTTGATCAATGATATTGATTCCGCGTGCG AACGTGTGCACTTGCTGTATTACTTGATGTTCGATGATGCGGTGGGTGATGCGGTTGTGGCTGCATTACAGTGTGCTGCG GCGCGTGGCGTTTCTTGCCGATTGCTGCTGGATGCAGTCGGTGCTAAACGCGGTCTACGTGCCTATCAGCAGTGCCTTCG TGCCCATGGTGTGGAGGTGCACGCTATGTTGCCTGGTGGGTTGCGCTGGCGTCGCAGTGGGCGTATGGATTTGCGCAACC ACCGTAAGATTGCTGTGATCGACAATCGTGTCGCTTATATCGGTTCGCAGAATTTGGCATGCCCAGATTTTGTGCCGCAT TTCCCCAACCGTGAATTGGTCGCACGCGTGTGCGGCCCTGCGGTAAGTCATCTGGAGGCGGTGTTCCTCAGTGATTGGTT TGTTGAAACTGGTCAACGTTTGGGGATGCGTCCAGATGTTCCCATATGTGAGCAAAATGTTGCGGCCCAGCTAGTGGCCA GCGGTCCGGCTTACCCGTACGAGAATGCGCGTGATGCGGTGAATACAATGATCCATTTGGCACGGCGGCGTATTGTCTTG ACGACGCCGTACTTCGTGCCTGATGAGGCCACATTCAGTGCGTTGCGTATTGCAGGCACGTCTGGAGTAGACGTGCAGTT GATCCTGTCCGAGAGTAATAACCAGTTTCTGATGGCCTGGGCTCAGGAGGCGTACTTTGAGGAGCTGTTGCGCGCAGGAA TCAAAATTGCGTTGTATCGTCCCCATTTCCTGCATGCCAAGCATCTGAGTGTGGATGATGATATTGCGTTGTTCGGATCG ATTAATTTGGACATCCGCTCGTTCGCGCTTAACGCTGAGATTGGCATGATTTGTTACGACTCACGTATTGTGACTCGGTT ACGTGAGGTGGAGAGTGATTATCTGGCCAATGCGCGCCAGCTTAATTTGGTTGAGTGGCAGCAACGTCCCGCTTGGCGTC GTAGCCGTGAGGGTATTGCACGCTTGGCAGATGCTCTGATGTAG
Upstream 100 bases:
>100_bases GTGGAGTCAGGCGCTAGTTGGTTGCTTTGCGATGACTCCGAAAGGTTCTGACATAGGGCCGTCCTGACTTTGTGCTGAGG AAAGTTCTTTGTAGGTTTGG
Downstream 100 bases:
>100_bases GTGTTGTGGATGCGTGTCGCGTGCCGCTATTGCAATCTTGAGTTATCCGATTGCTGATGTTTGCGCTGTGGTCGTTGTTG GTGAGGTTGCAGGTGCGATG
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MEGTWLFALDWVIRLVALLWIPARTTPSAARSWLLLIGFVPVFGLPLYLVFGHPWLSRKRVLRQALASHVIREWQRGLGA LRWQPQENGVAAELVPLVEHQGDFMPTRGNALDLLDDYQASLHLLINDIDSACERVHLLYYLMFDDAVGDAVVAALQCAA ARGVSCRLLLDAVGAKRGLRAYQQCLRAHGVEVHAMLPGGLRWRRSGRMDLRNHRKIAVIDNRVAYIGSQNLACPDFVPH FPNRELVARVCGPAVSHLEAVFLSDWFVETGQRLGMRPDVPICEQNVAAQLVASGPAYPYENARDAVNTMIHLARRRIVL TTPYFVPDEATFSALRIAGTSGVDVQLILSESNNQFLMAWAQEAYFEELLRAGIKIALYRPHFLHAKHLSVDDDIALFGS INLDIRSFALNAEIGMICYDSRIVTRLREVESDYLANARQLNLVEWQQRPAWRRSREGIARLADALM
Sequences:
>Translated_467_residues MEGTWLFALDWVIRLVALLWIPARTTPSAARSWLLLIGFVPVFGLPLYLVFGHPWLSRKRVLRQALASHVIREWQRGLGA LRWQPQENGVAAELVPLVEHQGDFMPTRGNALDLLDDYQASLHLLINDIDSACERVHLLYYLMFDDAVGDAVVAALQCAA ARGVSCRLLLDAVGAKRGLRAYQQCLRAHGVEVHAMLPGGLRWRRSGRMDLRNHRKIAVIDNRVAYIGSQNLACPDFVPH FPNRELVARVCGPAVSHLEAVFLSDWFVETGQRLGMRPDVPICEQNVAAQLVASGPAYPYENARDAVNTMIHLARRRIVL TTPYFVPDEATFSALRIAGTSGVDVQLILSESNNQFLMAWAQEAYFEELLRAGIKIALYRPHFLHAKHLSVDDDIALFGS INLDIRSFALNAEIGMICYDSRIVTRLREVESDYLANARQLNLVEWQQRPAWRRSREGIARLADALM >Mature_467_residues MEGTWLFALDWVIRLVALLWIPARTTPSAARSWLLLIGFVPVFGLPLYLVFGHPWLSRKRVLRQALASHVIREWQRGLGA LRWQPQENGVAAELVPLVEHQGDFMPTRGNALDLLDDYQASLHLLINDIDSACERVHLLYYLMFDDAVGDAVVAALQCAA ARGVSCRLLLDAVGAKRGLRAYQQCLRAHGVEVHAMLPGGLRWRRSGRMDLRNHRKIAVIDNRVAYIGSQNLACPDFVPH FPNRELVARVCGPAVSHLEAVFLSDWFVETGQRLGMRPDVPICEQNVAAQLVASGPAYPYENARDAVNTMIHLARRRIVL TTPYFVPDEATFSALRIAGTSGVDVQLILSESNNQFLMAWAQEAYFEELLRAGIKIALYRPHFLHAKHLSVDDDIALFGS INLDIRSFALNAEIGMICYDSRIVTRLREVESDYLANARQLNLVEWQQRPAWRRSREGIARLADALM
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=467, Percent_Identity=34.0471092077088, Blast_Score=252, Evalue=3e-68, Organism=Escherichia coli, GI1787007, Length=359, Percent_Identity=27.2980501392758, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 52570; Mature: 52570
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGTWLFALDWVIRLVALLWIPARTTPSAARSWLLLIGFVPVFGLPLYLVFGHPWLSRKR CCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHCCCCHHHHH VLRQALASHVIREWQRGLGALRWQPQENGVAAELVPLVEHQGDFMPTRGNALDLLDDYQA HHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH SLHLLINDIDSACERVHLLYYLMFDDAVGDAVVAALQCAAARGVSCRLLLDAVGAKRGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCHHHHHH AYQQCLRAHGVEVHAMLPGGLRWRRSGRMDLRNHRKIAVIDNRVAYIGSQNLACPDFVPH HHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCCCCC FPNRELVARVCGPAVSHLEAVFLSDWFVETGQRLGMRPDVPICEQNVAAQLVASGPAYPY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCC ENARDAVNTMIHLARRRIVLTTPYFVPDEATFSALRIAGTSGVDVQLILSESNNQFLMAW CCHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHEEEECCCCCEEEEEEECCCCEEEEEH AQEAYFEELLRAGIKIALYRPHFLHAKHLSVDDDIALFGSINLDIRSFALNAEIGMICYD HHHHHHHHHHHCCCEEEEECCCEECEECCCCCCCEEEEEEECEEEEEEEECCCEEEEEEC SRIVTRLREVESDYLANARQLNLVEWQQRPAWRRSREGIARLADALM HHHHHHHHHHHHHHHCCCHHCCHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEGTWLFALDWVIRLVALLWIPARTTPSAARSWLLLIGFVPVFGLPLYLVFGHPWLSRKR CCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHCCCCHHHHH VLRQALASHVIREWQRGLGALRWQPQENGVAAELVPLVEHQGDFMPTRGNALDLLDDYQA HHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH SLHLLINDIDSACERVHLLYYLMFDDAVGDAVVAALQCAAARGVSCRLLLDAVGAKRGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCHHHHHH AYQQCLRAHGVEVHAMLPGGLRWRRSGRMDLRNHRKIAVIDNRVAYIGSQNLACPDFVPH HHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCCCCC FPNRELVARVCGPAVSHLEAVFLSDWFVETGQRLGMRPDVPICEQNVAAQLVASGPAYPY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCC ENARDAVNTMIHLARRRIVLTTPYFVPDEATFSALRIAGTSGVDVQLILSESNNQFLMAW CCHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHEEEECCCCCEEEEEEECCCCEEEEEH AQEAYFEELLRAGIKIALYRPHFLHAKHLSVDDDIALFGSINLDIRSFALNAEIGMICYD HHHHHHHHHHHCCCEEEEECCCEECEECCCCCCCEEEEEEECEEEEEEEECCCEEEEEEC SRIVTRLREVESDYLANARQLNLVEWQQRPAWRRSREGIARLADALM HHHHHHHHHHHHHHHCCCHHCCHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA