Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182680981
Identifier: 182680981
GI number: 182680981
Start: 524424
End: 524642
Strand: Direct
Name: 182680981
Synonym: XfasM23_0420
Alternate gene names: NA
Gene position: 524424-524642 (Clockwise)
Preceding gene: 182680980
Following gene: 182680993
Centisome position: 20.68
GC content: 42.92
Gene sequence:
>219_bases TTGGTAACGCTTGCTAAGCGCATCGTTGCGCTTAGCAAGGAAGATTACAGTATTTCAGAGATTGCTAATTTGCTGTTATA CACCGAAAGCAACATTGAAGGAGTATTGGCGTTGACGTATGTCAAGAGGAAACCCCGGGGATCGATCTTGCTCCAGTACT TTCATGGAAATGTGGAAATGTTGGCGCACTGGAAAACAATGTTAGTAGGTTTTTGCTAA
Upstream 100 bases:
>100_bases ATCTGTAGCCTTGTGTCGGAACGGCGATGAAAAAGATCGAAACAAAGATTGAGGCAGGCTTTTTGACAGGTTTTACGAAG AAATCATTGCAGTATCTGGA
Downstream 100 bases:
>100_bases TGCATTGAATACTTTTCGCAGCCGTTTGTATTTTTAATGCGATTGTATCTTCACGTAATGACTTCAGTAGGCCATTGGAT GACGTCCGAGCAGCGGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MVTLAKRIVALSKEDYSISEIANLLLYTESNIEGVLALTYVKRKPRGSILLQYFHGNVEMLAHWKTMLVGFC
Sequences:
>Translated_72_residues MVTLAKRIVALSKEDYSISEIANLLLYTESNIEGVLALTYVKRKPRGSILLQYFHGNVEMLAHWKTMLVGFC >Mature_72_residues MVTLAKRIVALSKEDYSISEIANLLLYTESNIEGVLALTYVKRKPRGSILLQYFHGNVEMLAHWKTMLVGFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8189; Mature: 8189
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLAKRIVALSKEDYSISEIANLLLYTESNIEGVLALTYVKRKPRGSILLQYFHGNVEM CCHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCEEEEEEEECCCCCCCEEEEEECCCHHH LAHWKTMLVGFC HHHHHHHHHCCC >Mature Secondary Structure MVTLAKRIVALSKEDYSISEIANLLLYTESNIEGVLALTYVKRKPRGSILLQYFHGNVEM CCHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCEEEEEEEECCCCCCCEEEEEECCCHHH LAHWKTMLVGFC HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA