Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is yaeT [H]
Identifier: 182680884
GI number: 182680884
Start: 417744
End: 420098
Strand: Reverse
Name: yaeT [H]
Synonym: XfasM23_0322
Alternate gene names: 182680884
Gene position: 420098-417744 (Counterclockwise)
Preceding gene: 182680885
Following gene: 182680883
Centisome position: 16.57
GC content: 50.53
Gene sequence:
>2355_bases ATGACGCGATTTTACACCCGCCATTTACTTACCCTAACCATTGCTGCCAATTTCGGCTTACCTGTCTTGACACAGGCCGC CGAATCCTTCGTTGCAAACGATATACGCGTCGACGGCCTACAGCGCATCGCATCGGGAACGGTCTTTACCTACCTACCGG TTAACCGGGGAGACACTGTGGATGACGCTAAAGTTGCTGATGCAATCCGTGCACTGTACCGCACCGGTTTTTTTGAAAAC GTTCGGATAGACCGCCAAGGTAATATATTGGTCGTCAAAGTCAAAGAACGCCCGGCAATTAATAAGCTGACCATCACAGG AAATAAGGACATCAAGTCCGAAGAACTCCTCAAGGGCCTATCTGAGATCGGACTGAGCGAAGGAGGTACCTTCGACCGGC TCAGCCTGGACCGCGTTACCCAAGAGCTGAAACGCCAGTACAACAATCGCGGTAAATACAACGTTCAGATGACAACAACG ACCACTCCATTGGATCGTAACCGTGTGGATGTAACAATCGCGATTAAAGAAGGCAAGGCTGCCAAAATCCGGCACATCAA TCTGATCGGCACTGAAAAATTCAATAACAAAGATGTCATGAGTGCCTGGGAATCCAAGGAACACAACTGGGCTTCCTGGT ACCGCCGTGACGACCAATACTCTAAGGAAAAGCTGTCTGGAGACCTTGAGAAGCTGAACTCCTGGTACTTGGATCGTGGC TACGTCGATTTCAATATTGACTCAACTCAAGTGTCGATCAGCCCCGAAAAGCACAACATGTTCATTACTGCCGGCGTCAC AGAAGGCGATCAATACAAGATCTCCTCCATCAAGGTAACAGGCAACACAGTATTACCTCAGGAAAAAATCGAAAAGCTAG TCATCCCCAAGACAGGTGACATTTTCTCGCGCGTTCTGCTGGAATACAGCTCGGCAGCGATCATTAATACGCTGAGCAAT ATCGGCTACGCATTTTCCAAGGTCAACCCAATCCCAACAGCCAACCGCGCTGACCGTACCGTCGCCGTCAACTTGCACGT TATCCCTGGGCCTCGCGTCACCGTGCGTCAGATCCTGTTCAAAGGTAATACCCGCACCTCCGATGAAGTACTACGTCGTG AAATGCGTCAGTTCGAAAACAGTTGGTACTCGCAAGCAGCGATTGACCGCTCCAAGATACGCCTGCAACGCCTGGGCTAC TTCGAAGCCGTGGACGTAGAGAGCACACCAGTTCCAGGAAGCAACGACCAAGTGGATATCGTCTATACCGTCAAAGAGAC TACCTCGGGTAGCTTCCAGGTCGGCCTGGGTTACTCGAAAACCTATGGTGTCACCACTTCAGTACAGTTATCGCAGAACA ATTTCCTTGGTAGTGGCAACCGCGTGTCCGTAGATGCTTCACGCAGCAGATACCAAGATCGCTATTCGTTCTCCTACACC AACCCGTTTTTCACCGACAATGGCGTCTCACTAGGCTATAACTTGGCCTACCAAAAATTAGACTACTCAGACTTCAACGC TGCGCAATACAACAGCAAGCGTATGTCAGGACAAACCATCTTTGGAATCCCGATTACAGAGAACGACACTGTCTCTTGGG TCATCGGTGCAGATAGCAACCAAATCACGACCTTCCCAGGTTCCACGCCAAAAGCAATTATTGACTACATCGACGCAGTC GGACAGCGTACCTTCCGCGCTTGGCGCACCGAGCTGGGCTGGGCACGTGACACTCGCAACGACTACTTCATGCCAAATCT TGGTATGTATCAGCGCATTGGCGCAGAAGTGACACTACCCGGCTCAACGATCAAGTACTACAAAATCAATTACCAGATCT CGAAATACTGGCCAATTATCCCGGCGTTAGTACTCAACACGCGCCTTGAAGTAGGCTACGGAGACGACTACGGAAAGAGT CACACTCGGATCCTTCCTGACGGGACTGTGGCCACTGCTTCCGGATTGCCTTTCTTCGAAAATTTCTACGCCGGTGGCAC CAACTCGGTACGAGGCTTCAGAGATAACACCCTAGGACCGCGCTCGGAAGTGACCGCACTGTACAATCAAGGCCAACCAT TGGGTGGTTCCTTCAAGACCGTTGGATCAACTGAAATGTACTTCCCAAAACTTTTCGACAGCCCATCGGCACGTATCTCG GCTTTCCTTGACGTCGGCAACGTCTTCAATGGCGTAAAGAACTTTACAACAAACGAATTACGTGCCTCCAGCGGCGTAGC GCTGCTATGGCGTGCCCCCATTGGCCCGATCTCTATCAGCTATGCATTTCCTATAAAGAAGAAAAACGACGACGAGATTG AGCGACTGCAATTCACCTTCGGCGGCCAATTCTAA
Upstream 100 bases:
>100_bases GAAGAACCGCTATGTGAGGTGAGACTGTGTTTAAGCGAAACTGTCGTCGTCATGCGTCGGCACCCTGTAACCCAAGTTAT CGACACCAATCGGATTTAAC
Downstream 100 bases:
>100_bases CTGCAAAATAGCAGGAACCTTCTTGTACTCCTAATACATCCGGCGAAGCATCCAGCCGCTTTAAAAACACAGGGTTTGCT CCCCCCAAGCACTACAATGC
Product: outer membrane protein assembly complex, YaeT protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 784; Mature: 783
Protein sequence:
>784_residues MTRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTVDDAKVADAIRALYRTGFFEN VRIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGLSEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTT TTPLDRNRVDVTIAIKEGKAAKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG YVDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGDIFSRVLLEYSSAAIINTLSN IGYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILFKGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGY FEAVDVESTPVPGSNDQVDIVYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYT NPFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSNQITTFPGSTPKAIIDYIDAV GQRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLPGSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKS HTRILPDGTVATASGLPFFENFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARIS AFLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTFGGQF
Sequences:
>Translated_784_residues MTRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTVDDAKVADAIRALYRTGFFEN VRIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGLSEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTT TTPLDRNRVDVTIAIKEGKAAKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG YVDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGDIFSRVLLEYSSAAIINTLSN IGYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILFKGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGY FEAVDVESTPVPGSNDQVDIVYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYT NPFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSNQITTFPGSTPKAIIDYIDAV GQRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLPGSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKS HTRILPDGTVATASGLPFFENFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARIS AFLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTFGGQF >Mature_783_residues TRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTVDDAKVADAIRALYRTGFFENV RIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGLSEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTTT TPLDRNRVDVTIAIKEGKAAKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRGY VDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGDIFSRVLLEYSSAAIINTLSNI GYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILFKGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGYF EAVDVESTPVPGSNDQVDIVYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYTN PFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSNQITTFPGSTPKAIIDYIDAVG QRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLPGSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKSH TRILPDGTVATASGLPFFENFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARISA FLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTFGGQF
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=820, Percent_Identity=35.8536585365854, Blast_Score=506, Evalue=1e-144,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 87932; Mature: 87801
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS01199 RIBOSOMAL_L1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTV CCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCC DDAKVADAIRALYRTGFFENVRIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGL CHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHH SEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTTTTPLDRNRVDVTIAIKEGKA HHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEEEEECCCC AKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG EEEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCHHHHHHHHEEECC YVDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGD EEEEEECCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHEEECCCCHH IFSRVLLEYSSAAIINTLSNIGYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILF HHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHC KGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGYFEAVDVESTPVPGSNDQVDI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEE VYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYT EEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCHHHHHCCCCEEEEC NPFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSN CCEECCCCCEECEEEEEEECCCCCCCCHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCC QITTFPGSTPKAIIDYIDAVGQRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLP EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEC GSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKSHTRILPDGTVATASGLPFFE CCEEEEEEEEEEEECCCCHHHHHHHHCEEEECCCCCCCCCCCEECCCCCEEECCCCCHHH NFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARIS HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCEECHHHCCCCCHHHE AFLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTF EEEHHHHHHHHHHCCCCCHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHEEEEEE GGQF CCCC >Mature Secondary Structure TRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTV CCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCC DDAKVADAIRALYRTGFFENVRIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGL CHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHH SEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTTTTPLDRNRVDVTIAIKEGKA HHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEEEEECCCC AKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG EEEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCHHHHHHHHEEECC YVDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGD EEEEEECCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHEEECCCCHH IFSRVLLEYSSAAIINTLSNIGYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILF HHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHC KGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGYFEAVDVESTPVPGSNDQVDI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEE VYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYT EEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCHHHHHCCCCEEEEC NPFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSN CCEECCCCCEECEEEEEEECCCCCCCCHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCC QITTFPGSTPKAIIDYIDAVGQRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLP EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEC GSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKSHTRILPDGTVATASGLPFFE CCEEEEEEEEEEEECCCCHHHHHHHHCEEEECCCCCCCCCCCEECCCCCEEECCCCCHHH NFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARIS HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCEECHHHCCCCCHHHE AFLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTF EEEHHHHHHHHHHCCCCCHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHEEEEEE GGQF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA