Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is yaeT [H]

Identifier: 182680884

GI number: 182680884

Start: 417744

End: 420098

Strand: Reverse

Name: yaeT [H]

Synonym: XfasM23_0322

Alternate gene names: 182680884

Gene position: 420098-417744 (Counterclockwise)

Preceding gene: 182680885

Following gene: 182680883

Centisome position: 16.57

GC content: 50.53

Gene sequence:

>2355_bases
ATGACGCGATTTTACACCCGCCATTTACTTACCCTAACCATTGCTGCCAATTTCGGCTTACCTGTCTTGACACAGGCCGC
CGAATCCTTCGTTGCAAACGATATACGCGTCGACGGCCTACAGCGCATCGCATCGGGAACGGTCTTTACCTACCTACCGG
TTAACCGGGGAGACACTGTGGATGACGCTAAAGTTGCTGATGCAATCCGTGCACTGTACCGCACCGGTTTTTTTGAAAAC
GTTCGGATAGACCGCCAAGGTAATATATTGGTCGTCAAAGTCAAAGAACGCCCGGCAATTAATAAGCTGACCATCACAGG
AAATAAGGACATCAAGTCCGAAGAACTCCTCAAGGGCCTATCTGAGATCGGACTGAGCGAAGGAGGTACCTTCGACCGGC
TCAGCCTGGACCGCGTTACCCAAGAGCTGAAACGCCAGTACAACAATCGCGGTAAATACAACGTTCAGATGACAACAACG
ACCACTCCATTGGATCGTAACCGTGTGGATGTAACAATCGCGATTAAAGAAGGCAAGGCTGCCAAAATCCGGCACATCAA
TCTGATCGGCACTGAAAAATTCAATAACAAAGATGTCATGAGTGCCTGGGAATCCAAGGAACACAACTGGGCTTCCTGGT
ACCGCCGTGACGACCAATACTCTAAGGAAAAGCTGTCTGGAGACCTTGAGAAGCTGAACTCCTGGTACTTGGATCGTGGC
TACGTCGATTTCAATATTGACTCAACTCAAGTGTCGATCAGCCCCGAAAAGCACAACATGTTCATTACTGCCGGCGTCAC
AGAAGGCGATCAATACAAGATCTCCTCCATCAAGGTAACAGGCAACACAGTATTACCTCAGGAAAAAATCGAAAAGCTAG
TCATCCCCAAGACAGGTGACATTTTCTCGCGCGTTCTGCTGGAATACAGCTCGGCAGCGATCATTAATACGCTGAGCAAT
ATCGGCTACGCATTTTCCAAGGTCAACCCAATCCCAACAGCCAACCGCGCTGACCGTACCGTCGCCGTCAACTTGCACGT
TATCCCTGGGCCTCGCGTCACCGTGCGTCAGATCCTGTTCAAAGGTAATACCCGCACCTCCGATGAAGTACTACGTCGTG
AAATGCGTCAGTTCGAAAACAGTTGGTACTCGCAAGCAGCGATTGACCGCTCCAAGATACGCCTGCAACGCCTGGGCTAC
TTCGAAGCCGTGGACGTAGAGAGCACACCAGTTCCAGGAAGCAACGACCAAGTGGATATCGTCTATACCGTCAAAGAGAC
TACCTCGGGTAGCTTCCAGGTCGGCCTGGGTTACTCGAAAACCTATGGTGTCACCACTTCAGTACAGTTATCGCAGAACA
ATTTCCTTGGTAGTGGCAACCGCGTGTCCGTAGATGCTTCACGCAGCAGATACCAAGATCGCTATTCGTTCTCCTACACC
AACCCGTTTTTCACCGACAATGGCGTCTCACTAGGCTATAACTTGGCCTACCAAAAATTAGACTACTCAGACTTCAACGC
TGCGCAATACAACAGCAAGCGTATGTCAGGACAAACCATCTTTGGAATCCCGATTACAGAGAACGACACTGTCTCTTGGG
TCATCGGTGCAGATAGCAACCAAATCACGACCTTCCCAGGTTCCACGCCAAAAGCAATTATTGACTACATCGACGCAGTC
GGACAGCGTACCTTCCGCGCTTGGCGCACCGAGCTGGGCTGGGCACGTGACACTCGCAACGACTACTTCATGCCAAATCT
TGGTATGTATCAGCGCATTGGCGCAGAAGTGACACTACCCGGCTCAACGATCAAGTACTACAAAATCAATTACCAGATCT
CGAAATACTGGCCAATTATCCCGGCGTTAGTACTCAACACGCGCCTTGAAGTAGGCTACGGAGACGACTACGGAAAGAGT
CACACTCGGATCCTTCCTGACGGGACTGTGGCCACTGCTTCCGGATTGCCTTTCTTCGAAAATTTCTACGCCGGTGGCAC
CAACTCGGTACGAGGCTTCAGAGATAACACCCTAGGACCGCGCTCGGAAGTGACCGCACTGTACAATCAAGGCCAACCAT
TGGGTGGTTCCTTCAAGACCGTTGGATCAACTGAAATGTACTTCCCAAAACTTTTCGACAGCCCATCGGCACGTATCTCG
GCTTTCCTTGACGTCGGCAACGTCTTCAATGGCGTAAAGAACTTTACAACAAACGAATTACGTGCCTCCAGCGGCGTAGC
GCTGCTATGGCGTGCCCCCATTGGCCCGATCTCTATCAGCTATGCATTTCCTATAAAGAAGAAAAACGACGACGAGATTG
AGCGACTGCAATTCACCTTCGGCGGCCAATTCTAA

Upstream 100 bases:

>100_bases
GAAGAACCGCTATGTGAGGTGAGACTGTGTTTAAGCGAAACTGTCGTCGTCATGCGTCGGCACCCTGTAACCCAAGTTAT
CGACACCAATCGGATTTAAC

Downstream 100 bases:

>100_bases
CTGCAAAATAGCAGGAACCTTCTTGTACTCCTAATACATCCGGCGAAGCATCCAGCCGCTTTAAAAACACAGGGTTTGCT
CCCCCCAAGCACTACAATGC

Product: outer membrane protein assembly complex, YaeT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 784; Mature: 783

Protein sequence:

>784_residues
MTRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTVDDAKVADAIRALYRTGFFEN
VRIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGLSEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTT
TTPLDRNRVDVTIAIKEGKAAKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG
YVDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGDIFSRVLLEYSSAAIINTLSN
IGYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILFKGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGY
FEAVDVESTPVPGSNDQVDIVYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYT
NPFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSNQITTFPGSTPKAIIDYIDAV
GQRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLPGSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKS
HTRILPDGTVATASGLPFFENFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARIS
AFLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTFGGQF

Sequences:

>Translated_784_residues
MTRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTVDDAKVADAIRALYRTGFFEN
VRIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGLSEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTT
TTPLDRNRVDVTIAIKEGKAAKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG
YVDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGDIFSRVLLEYSSAAIINTLSN
IGYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILFKGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGY
FEAVDVESTPVPGSNDQVDIVYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYT
NPFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSNQITTFPGSTPKAIIDYIDAV
GQRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLPGSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKS
HTRILPDGTVATASGLPFFENFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARIS
AFLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTFGGQF
>Mature_783_residues
TRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTVDDAKVADAIRALYRTGFFENV
RIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGLSEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTTT
TPLDRNRVDVTIAIKEGKAAKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRGY
VDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGDIFSRVLLEYSSAAIINTLSNI
GYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILFKGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGYF
EAVDVESTPVPGSNDQVDIVYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYTN
PFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSNQITTFPGSTPKAIIDYIDAVG
QRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLPGSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKSH
TRILPDGTVATASGLPFFENFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARISA
FLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTFGGQF

Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=820, Percent_Identity=35.8536585365854, Blast_Score=506, Evalue=1e-144,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 87932; Mature: 87801

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS01199 RIBOSOMAL_L1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTV
CCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCC
DDAKVADAIRALYRTGFFENVRIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGL
CHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHH
SEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTTTTPLDRNRVDVTIAIKEGKA
HHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEEEEECCCC
AKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG
EEEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCHHHHHHHHEEECC
YVDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGD
EEEEEECCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHEEECCCCHH
IFSRVLLEYSSAAIINTLSNIGYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILF
HHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHC
KGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGYFEAVDVESTPVPGSNDQVDI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEE
VYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYT
EEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCHHHHHCCCCEEEEC
NPFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSN
CCEECCCCCEECEEEEEEECCCCCCCCHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCC
QITTFPGSTPKAIIDYIDAVGQRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLP
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEC
GSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKSHTRILPDGTVATASGLPFFE
CCEEEEEEEEEEEECCCCHHHHHHHHCEEEECCCCCCCCCCCEECCCCCEEECCCCCHHH
NFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARIS
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCEECHHHCCCCCHHHE
AFLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTF
EEEHHHHHHHHHHCCCCCHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHEEEEEE
GGQF
CCCC
>Mature Secondary Structure 
TRFYTRHLLTLTIAANFGLPVLTQAAESFVANDIRVDGLQRIASGTVFTYLPVNRGDTV
CCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCC
DDAKVADAIRALYRTGFFENVRIDRQGNILVVKVKERPAINKLTITGNKDIKSEELLKGL
CHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHH
SEIGLSEGGTFDRLSLDRVTQELKRQYNNRGKYNVQMTTTTTPLDRNRVDVTIAIKEGKA
HHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEEEEECCCC
AKIRHINLIGTEKFNNKDVMSAWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG
EEEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCHHHHHHHHEEECC
YVDFNIDSTQVSISPEKHNMFITAGVTEGDQYKISSIKVTGNTVLPQEKIEKLVIPKTGD
EEEEEECCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHEEECCCCHH
IFSRVLLEYSSAAIINTLSNIGYAFSKVNPIPTANRADRTVAVNLHVIPGPRVTVRQILF
HHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHC
KGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGYFEAVDVESTPVPGSNDQVDI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEE
VYTVKETTSGSFQVGLGYSKTYGVTTSVQLSQNNFLGSGNRVSVDASRSRYQDRYSFSYT
EEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCHHHHHCCCCEEEEC
NPFFTDNGVSLGYNLAYQKLDYSDFNAAQYNSKRMSGQTIFGIPITENDTVSWVIGADSN
CCEECCCCCEECEEEEEEECCCCCCCCHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCC
QITTFPGSTPKAIIDYIDAVGQRTFRAWRTELGWARDTRNDYFMPNLGMYQRIGAEVTLP
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEC
GSTIKYYKINYQISKYWPIIPALVLNTRLEVGYGDDYGKSHTRILPDGTVATASGLPFFE
CCEEEEEEEEEEEECCCCHHHHHHHHCEEEECCCCCCCCCCCEECCCCCEEECCCCCHHH
NFYAGGTNSVRGFRDNTLGPRSEVTALYNQGQPLGGSFKTVGSTEMYFPKLFDSPSARIS
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCEECHHHCCCCCHHHE
AFLDVGNVFNGVKNFTTNELRASSGVALLWRAPIGPISISYAFPIKKKNDDEIERLQFTF
EEEHHHHHHHHHHCCCCCHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHEEEEEE
GGQF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA