Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ate
Identifier: 182680867
GI number: 182680867
Start: 388901
End: 389665
Strand: Reverse
Name: ate
Synonym: XfasM23_0304
Alternate gene names: 182680867
Gene position: 389665-388901 (Counterclockwise)
Preceding gene: 182680868
Following gene: 182680866
Centisome position: 15.37
GC content: 57.12
Gene sequence:
>765_bases ATGGCGATAGACTCCAAACCACACGACGACCTACAGCTATTCAAGACCAACCTTCACCCATGCGGTTACTGGCCGGACAG ATGGGCAAGCGATTTGGTCATGGACCCAAACGACCCCCGCCTGGGTGCCATCTACCCCCAAACCCTGGCTTGGGGCTTCC GTCGCTCCGGCAACCTGCTGTACAGACCACACTGCGAACACTGCAATGCCTGCGTCCCAGTACGCGTCAATGTCAATGCT TTCGTTCCAAATCGTAGCCAGCGTCGCTGCCTGGCCCGCAACGCCACGCTTGTCACACGCATCGTGCCGGCCGAACGTAA CGCAGAACAACTTTCACTCTACCGCCGCTACCTGCACCAACGTCATCCCGATGGCGGCATGGATGGTCACGGGGCCATTG AATTTGATCAATTCCTGATCGGCCCCTGGGGATACGGGCGCTTCATGGAAATCCGCGAACCCGCCACCAACGGCACACCC GGCCAACTACTGGCAGTCGCAGTCACTGACCTAACCCACCAAGCCTTATCAGCCGTATACACCTTCTACGAACCAAACGC AGCGGCCCGCGGCCTCGGCACACTGGCCATCCTGCATCAAATCCACTGGGCACAACGCGAACAGCGCCCATACCTGTACC TGGGTTATTGGATCAAAGACCACTTCAAAATGGATTACAAACGCCGCTTCCAAAAACTTGAAATATATGACGGCTACCGC TGGCGCCCCTTCAGCACCACCTATCCAACAACGCACACCCTATAA
Upstream 100 bases:
>100_bases CAGACAGACAGGCACACATGCCGTTGTGACCCTGACAGCAACATTCACCCCATAAGAAAATCACGAACCATGCACCCCCA GTAGCCACTATGCTGCAATC
Downstream 100 bases:
>100_bases CCCATACACCCAACATCGCATCCAACAACGACTGAATGATCTACTTCTCGTGACCACACCGTTTCAATTCGGCAACACCA CACCGCACCCCAAAAACACC
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAIDSKPHDDLQLFKTNLHPCGYWPDRWASDLVMDPNDPRLGAIYPQTLAWGFRRSGNLLYRPHCEHCNACVPVRVNVNA FVPNRSQRRCLARNATLVTRIVPAERNAEQLSLYRRYLHQRHPDGGMDGHGAIEFDQFLIGPWGYGRFMEIREPATNGTP GQLLAVAVTDLTHQALSAVYTFYEPNAAARGLGTLAILHQIHWAQREQRPYLYLGYWIKDHFKMDYKRRFQKLEIYDGYR WRPFSTTYPTTHTL
Sequences:
>Translated_254_residues MAIDSKPHDDLQLFKTNLHPCGYWPDRWASDLVMDPNDPRLGAIYPQTLAWGFRRSGNLLYRPHCEHCNACVPVRVNVNA FVPNRSQRRCLARNATLVTRIVPAERNAEQLSLYRRYLHQRHPDGGMDGHGAIEFDQFLIGPWGYGRFMEIREPATNGTP GQLLAVAVTDLTHQALSAVYTFYEPNAAARGLGTLAILHQIHWAQREQRPYLYLGYWIKDHFKMDYKRRFQKLEIYDGYR WRPFSTTYPTTHTL >Mature_253_residues AIDSKPHDDLQLFKTNLHPCGYWPDRWASDLVMDPNDPRLGAIYPQTLAWGFRRSGNLLYRPHCEHCNACVPVRVNVNAF VPNRSQRRCLARNATLVTRIVPAERNAEQLSLYRRYLHQRHPDGGMDGHGAIEFDQFLIGPWGYGRFMEIREPATNGTPG QLLAVAVTDLTHQALSAVYTFYEPNAAARGLGTLAILHQIHWAQREQRPYLYLGYWIKDHFKMDYKRRFQKLEIYDGYRW RPFSTTYPTTHTL
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_XYLF2 (B2I7M5)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001829027.1 - GeneID: 6204117 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_0304 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 29530; Mature: 29399
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDSKPHDDLQLFKTNLHPCGYWPDRWASDLVMDPNDPRLGAIYPQTLAWGFRRSGNLL CCCCCCCCCHHHHHHHCCCCCCCCCCHHCCCCEECCCCCCEEEECHHHHHHHHHCCCCEE YRPHCEHCNACVPVRVNVNAFVPNRSQRRCLARNATLVTRIVPAERNAEQLSLYRRYLHQ ECCCCCCCCCEEEEEEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH RHPDGGMDGHGAIEFDQFLIGPWGYGRFMEIREPATNGTPGQLLAVAVTDLTHQALSAVY CCCCCCCCCCCCEEECCEEECCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHH TFYEPNAAARGLGTLAILHQIHWAQREQRPYLYLGYWIKDHFKMDYKRRFQKLEIYDGYR HEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCHHHHHHHEEEECCCCE WRPFSTTYPTTHTL ECCCCCCCCCCCCC >Mature Secondary Structure AIDSKPHDDLQLFKTNLHPCGYWPDRWASDLVMDPNDPRLGAIYPQTLAWGFRRSGNLL CCCCCCCCHHHHHHHCCCCCCCCCCHHCCCCEECCCCCCEEEECHHHHHHHHHCCCCEE YRPHCEHCNACVPVRVNVNAFVPNRSQRRCLARNATLVTRIVPAERNAEQLSLYRRYLHQ ECCCCCCCCCEEEEEEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH RHPDGGMDGHGAIEFDQFLIGPWGYGRFMEIREPATNGTPGQLLAVAVTDLTHQALSAVY CCCCCCCCCCCCEEECCEEECCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHH TFYEPNAAARGLGTLAILHQIHWAQREQRPYLYLGYWIKDHFKMDYKRRFQKLEIYDGYR HEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCHHHHHHHEEEECCCCE WRPFSTTYPTTHTL ECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA