Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680866
Identifier: 182680866
GI number: 182680866
Start: 388486
End: 388734
Strand: Reverse
Name: 182680866
Synonym: XfasM23_0303
Alternate gene names: NA
Gene position: 388734-388486 (Counterclockwise)
Preceding gene: 182680867
Following gene: 182680864
Centisome position: 15.33
GC content: 47.39
Gene sequence:
>249_bases TTGAATCGAACACGTAAAAAAGACAGCACAAGCAACGAACTGTTCCAACCACAGCCTCAACGTAACCTCACCTCACCACA TCACAGAACGCACTGGACTATCCGCACCTTCACCCCAACCAAAACAAATAGCGTCATGGCACAATGCCTCACATATCAAA ACGATACCCAACAAATAGCCAACACATCATTGTGGCGCCTGCTGCCAACATCGACACCATCAACAACCATGCAAACGGGC ATTCCATAA
Upstream 100 bases:
>100_bases ATTCGGCAACACCACACCGCACCCCAAAAACACCCATTCCGATGTACCCGTCAAACATCCCCACCACCAATACCTCACCG CATATACATAGAAAAAATAA
Downstream 100 bases:
>100_bases AAAGCCCCTTGAAACACAGCAAACCGATGCATAAACACAAAACACCATGACCATTGACTGCAACGCCCTCGCCGGATCAA TCACCTAACCACTGTTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MNRTRKKDSTSNELFQPQPQRNLTSPHHRTHWTIRTFTPTKTNSVMAQCLTYQNDTQQIANTSLWRLLPTSTPSTTMQTG IP
Sequences:
>Translated_82_residues MNRTRKKDSTSNELFQPQPQRNLTSPHHRTHWTIRTFTPTKTNSVMAQCLTYQNDTQQIANTSLWRLLPTSTPSTTMQTG IP >Mature_82_residues MNRTRKKDSTSNELFQPQPQRNLTSPHHRTHWTIRTFTPTKTNSVMAQCLTYQNDTQQIANTSLWRLLPTSTPSTTMQTG IP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9472; Mature: 9472
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTRKKDSTSNELFQPQPQRNLTSPHHRTHWTIRTFTPTKTNSVMAQCLTYQNDTQQIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHH NTSLWRLLPTSTPSTTMQTGIP CCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNRTRKKDSTSNELFQPQPQRNLTSPHHRTHWTIRTFTPTKTNSVMAQCLTYQNDTQQIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHH NTSLWRLLPTSTPSTTMQTGIP CCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA