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The map label for this gene is yebA [C]

Identifier: 182680838

GI number: 182680838

Start: 357616

End: 358473

Strand: Reverse

Name: yebA [C]

Synonym: XfasM23_0273

Alternate gene names: 182680838

Gene position: 358473-357616 (Counterclockwise)

Preceding gene: 182680839

Following gene: 182680831

Centisome position: 14.14

GC content: 54.31

Gene sequence:

>858_bases
ATGCTTGCACTCACTGTGAATAGGTTACTCGCGCTCGGTATGTTGGTCACAATGACTTTACCGCCCATTACATATGCCCA
GAACAAGATAAACACACAAGAAACCCGCTCTGAGTTTCCCACCAATGTATCCCAAGGCGCACTGGTGATCGGGACCGTCC
CAGCAGGCAGCCGAGTCGAGTACAGCGGACAGGTGTTGCGAGTCGATGACAAGGGTCAGGTTGTCTTTGGAGTAGGCCGT
AATGAAACCGGACCACTGATACTACGTATCCAAACCCCAAAAGGGACTGTCAAACAAGTCAACATCAACGTGACAACACG
CCAATGGCCGCTTGAGGTGGTCAACGGCGTGCCGCCAAAAACAGTCAATCCACCACCAGCAATTGCTGCACGGATCACCC
GTGAACAAGCACAAATCACTGATGCACGCCAGCGCAACGACGCTCGCTCGGATTTCGCCCAAGCCTTTATCTGGCCTGTA
CAAGGCCGAATCAGCGGACGTTTCGGCAGCGAACGCATCTACAACGGTCAAACTGCAGGCAACGGGCACTCAGGGATGGA
CATCGCCACAGCAACCGGGACGCCGGTAAAGGCACCAGCGGCTGGTGTGATCACCTTCGCCGCACCAGATTTGTACCTGA
CAGGCGGCACAGTGTTGTTAGACCATGGCGCTGGAGTCAGCTCCAACTTTCTGCACCTATCACGGATTGATGTAAAAGCT
GGCGATCACGTGGATCAAGGTCAAGTCATCGGTGCAGTCGGTGCAACTGGGCGAGCCACCGGACCGCACTTACATTGGGG
GATGAATTGGTTCAACGTGCGTATTGATCCTTTGTTAATACTCGAACGCACCCGCTAG

Upstream 100 bases:

>100_bases
GTTCTCGTATCGCTTCCACGTGGGTCAACGGCAACCATGTGTGGGACGGCAACCGCCTTGTTGGCGTACCGAACGGCCAA
CGTCTGGAATTTGACCGCTG

Downstream 100 bases:

>100_bases
ACATTCGCGACCTGACAAAACCACTCCACAACAGCACATTCACTCAATCTGGCAATGTATCGAACGGGGCACCGACACAA
TGGATGCCCCTTTTCCTTTT

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLALTVNRLLALGMLVTMTLPPITYAQNKINTQETRSEFPTNVSQGALVIGTVPAGSRVEYSGQVLRVDDKGQVVFGVGR
NETGPLILRIQTPKGTVKQVNINVTTRQWPLEVVNGVPPKTVNPPPAIAARITREQAQITDARQRNDARSDFAQAFIWPV
QGRISGRFGSERIYNGQTAGNGHSGMDIATATGTPVKAPAAGVITFAAPDLYLTGGTVLLDHGAGVSSNFLHLSRIDVKA
GDHVDQGQVIGAVGATGRATGPHLHWGMNWFNVRIDPLLILERTR

Sequences:

>Translated_285_residues
MLALTVNRLLALGMLVTMTLPPITYAQNKINTQETRSEFPTNVSQGALVIGTVPAGSRVEYSGQVLRVDDKGQVVFGVGR
NETGPLILRIQTPKGTVKQVNINVTTRQWPLEVVNGVPPKTVNPPPAIAARITREQAQITDARQRNDARSDFAQAFIWPV
QGRISGRFGSERIYNGQTAGNGHSGMDIATATGTPVKAPAAGVITFAAPDLYLTGGTVLLDHGAGVSSNFLHLSRIDVKA
GDHVDQGQVIGAVGATGRATGPHLHWGMNWFNVRIDPLLILERTR
>Mature_285_residues
MLALTVNRLLALGMLVTMTLPPITYAQNKINTQETRSEFPTNVSQGALVIGTVPAGSRVEYSGQVLRVDDKGQVVFGVGR
NETGPLILRIQTPKGTVKQVNINVTTRQWPLEVVNGVPPKTVNPPPAIAARITREQAQITDARQRNDARSDFAQAFIWPV
QGRISGRFGSERIYNGQTAGNGHSGMDIATATGTPVKAPAAGVITFAAPDLYLTGGTVLLDHGAGVSSNFLHLSRIDVKA
GDHVDQGQVIGAVGATGRATGPHLHWGMNWFNVRIDPLLILERTR

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=168, Percent_Identity=32.1428571428571, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 30522; Mature: 30522

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALTVNRLLALGMLVTMTLPPITYAQNKINTQETRSEFPTNVSQGALVIGTVPAGSRVE
CEEEEHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCEEE
YSGQVLRVDDKGQVVFGVGRNETGPLILRIQTPKGTVKQVNINVTTRQWPLEVVNGVPPK
ECCCEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEECCCCHHHHCCCCCC
TVNPPPAIAARITREQAQITDARQRNDARSDFAQAFIWPVQGRISGRFGSERIYNGQTAG
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCEEECCCCCCEEECCCCCC
NGHSGMDIATATGTPVKAPAAGVITFAAPDLYLTGGTVLLDHGAGVSSNFLHLSRIDVKA
CCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEECCEEEEECCCCCCCCEEEEEEEEECC
GDHVDQGQVIGAVGATGRATGPHLHWGMNWFNVRIDPLLILERTR
CCCCCCCCEEEEECCCCCCCCCEEEECCEEEEEEECEEEEEEECC
>Mature Secondary Structure
MLALTVNRLLALGMLVTMTLPPITYAQNKINTQETRSEFPTNVSQGALVIGTVPAGSRVE
CEEEEHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCEEE
YSGQVLRVDDKGQVVFGVGRNETGPLILRIQTPKGTVKQVNINVTTRQWPLEVVNGVPPK
ECCCEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEECCCCHHHHCCCCCC
TVNPPPAIAARITREQAQITDARQRNDARSDFAQAFIWPVQGRISGRFGSERIYNGQTAG
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCEEECCCCCCEEECCCCCC
NGHSGMDIATATGTPVKAPAAGVITFAAPDLYLTGGTVLLDHGAGVSSNFLHLSRIDVKA
CCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEECCEEEEECCCCCCCCEEEEEEEEECC
GDHVDQGQVIGAVGATGRATGPHLHWGMNWFNVRIDPLLILERTR
CCCCCCCCEEEEECCCCCCCCCEEEECCEEEEEEECEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]