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The map label for this gene is yfcH [H]

Identifier: 182680792

GI number: 182680792

Start: 295500

End: 296396

Strand: Reverse

Name: yfcH [H]

Synonym: XfasM23_0221

Alternate gene names: 182680792

Gene position: 296396-295500 (Counterclockwise)

Preceding gene: 182680793

Following gene: 182680791

Centisome position: 11.69

GC content: 53.96

Gene sequence:

>897_bases
ATGCGCCTGCTTATCACTGGTGGTACTGGTTTCATAGGCACTCCACTATGTGCCATGCTCATTGGGGGTGGCCATCAGGT
CACCGTGCTGAGTCGCGATCCCACACGACATAGTGCACGTTTACCTCAAGTGCAACTTGTAAACACGTTGGAGAACGTCG
TCACGCCAATTGATGCGATCATCAACCTGGCTGGAAAATCTCTGTTGGAAGGACGCTGGAACAAACACATTAAGGAAGAG
ATCCGCTCGTCGCGGTTACAAACGACACGCCGATTATATGACTGGATTGCCACTCTTGCCGTTGAACGGCGTCCGCGTCG
GTTGATCTCTGCTTCCGCCATTGGTTACTACGGGGAATGTGGGGATACGCCTCTCAAAGAATCCGCACCACCTGGAAACG
ATTTCGCTGCACAACTCTGCCGCGACTGGGAAAACGAAGCACTACGGATCAGTGCACTGGGTTCACAGGTGAGTCTGATA
CGTATCGGTATCGTACTTGAACGCGACGGCGGTGCATTGGGCCAAATGCTGCCGGCCTTCCGGTTCGGCGTTGGTGGACG
CTTTGGGAACGGGCAACATTGGATGAGCTGGATCCATCGCGAAGACCTCATCAATATGATCATTTGGCTCATCGAGCATG
GTCAGCCTGGGGCTTACAATCTCACCGCACCACATCCAGTCATCAACGCTGCCTTCGTTCGGGCACTCGGTGCAATCCTG
CACCGTCCTACGCTGTTCACGCTACCACCGCAGCTACTGCGGCTGTGCTTCGGCGAGATAGCAGATCTACTCACCCTCAG
CCAACGCGTCAAACCGGGACGAGCACTGGAAGAAGGCTATCGTTTCAAGCACACCGACATCAACGCTGCATTGGCTTCAA
TCTTGCGAAAAAATTAA

Upstream 100 bases:

>100_bases
ACTTTAAGATTACCCTGCAATACTGCCGAAAAAGATAGGCACTTTAAATCCTGTCTCTCCCCGGCTCATACTGTGGTTCT
CTACAGAACACTTTCTATTT

Downstream 100 bases:

>100_bases
CGCTGTATCCCAATGACTACCTCCACGCCCCGGTCCCAGATTTATATAAAGAGGTCACCACACATTACCTGGCTCCGCCT
ATAGCTATAACACGAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRLLITGGTGFIGTPLCAMLIGGGHQVTVLSRDPTRHSARLPQVQLVNTLENVVTPIDAIINLAGKSLLEGRWNKHIKEE
IRSSRLQTTRRLYDWIATLAVERRPRRLISASAIGYYGECGDTPLKESAPPGNDFAAQLCRDWENEALRISALGSQVSLI
RIGIVLERDGGALGQMLPAFRFGVGGRFGNGQHWMSWIHREDLINMIIWLIEHGQPGAYNLTAPHPVINAAFVRALGAIL
HRPTLFTLPPQLLRLCFGEIADLLTLSQRVKPGRALEEGYRFKHTDINAALASILRKN

Sequences:

>Translated_298_residues
MRLLITGGTGFIGTPLCAMLIGGGHQVTVLSRDPTRHSARLPQVQLVNTLENVVTPIDAIINLAGKSLLEGRWNKHIKEE
IRSSRLQTTRRLYDWIATLAVERRPRRLISASAIGYYGECGDTPLKESAPPGNDFAAQLCRDWENEALRISALGSQVSLI
RIGIVLERDGGALGQMLPAFRFGVGGRFGNGQHWMSWIHREDLINMIIWLIEHGQPGAYNLTAPHPVINAAFVRALGAIL
HRPTLFTLPPQLLRLCFGEIADLLTLSQRVKPGRALEEGYRFKHTDINAALASILRKN
>Mature_298_residues
MRLLITGGTGFIGTPLCAMLIGGGHQVTVLSRDPTRHSARLPQVQLVNTLENVVTPIDAIINLAGKSLLEGRWNKHIKEE
IRSSRLQTTRRLYDWIATLAVERRPRRLISASAIGYYGECGDTPLKESAPPGNDFAAQLCRDWENEALRISALGSQVSLI
RIGIVLERDGGALGQMLPAFRFGVGGRFGNGQHWMSWIHREDLINMIIWLIEHGQPGAYNLTAPHPVINAAFVRALGAIL
HRPTLFTLPPQLLRLCFGEIADLLTLSQRVKPGRALEEGYRFKHTDINAALASILRKN

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=300, Percent_Identity=35.3333333333333, Blast_Score=160, Evalue=9e-40,
Organism=Escherichia coli, GI1788642, Length=299, Percent_Identity=41.8060200668896, Blast_Score=237, Evalue=9e-64,
Organism=Drosophila melanogaster, GI28573846, Length=300, Percent_Identity=31, Blast_Score=149, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32984; Mature: 32984

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLITGGTGFIGTPLCAMLIGGGHQVTVLSRDPTRHSARLPQVQLVNTLENVVTPIDAI
CEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHH
INLAGKSLLEGRWNKHIKEEIRSSRLQTTRRLYDWIATLAVERRPRRLISASAIGYYGEC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GDTPLKESAPPGNDFAAQLCRDWENEALRISALGSQVSLIRIGIVLERDGGALGQMLPAF
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHH
RFGVGGRFGNGQHWMSWIHREDLINMIIWLIEHGQPGAYNLTAPHPVINAAFVRALGAIL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
HRPTLFTLPPQLLRLCFGEIADLLTLSQRVKPGRALEEGYRFKHTDINAALASILRKN
HCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRLLITGGTGFIGTPLCAMLIGGGHQVTVLSRDPTRHSARLPQVQLVNTLENVVTPIDAI
CEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHH
INLAGKSLLEGRWNKHIKEEIRSSRLQTTRRLYDWIATLAVERRPRRLISASAIGYYGEC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GDTPLKESAPPGNDFAAQLCRDWENEALRISALGSQVSLIRIGIVLERDGGALGQMLPAF
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHH
RFGVGGRFGNGQHWMSWIHREDLINMIIWLIEHGQPGAYNLTAPHPVINAAFVRALGAIL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
HRPTLFTLPPQLLRLCFGEIADLLTLSQRVKPGRALEEGYRFKHTDINAALASILRKN
HCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]