Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680790
Identifier: 182680790
GI number: 182680790
Start: 293152
End: 293517
Strand: Reverse
Name: 182680790
Synonym: XfasM23_0219
Alternate gene names: NA
Gene position: 293517-293152 (Counterclockwise)
Preceding gene: 182680791
Following gene: 182680789
Centisome position: 11.58
GC content: 54.1
Gene sequence:
>366_bases ATGATGAACCCTACCAACACCGAGCACCTTAAGGATAACTTGAACCAAGCTGGAGCGCGTCTGAAATCCGCAGCACTCGC TGCAAGCGAAGCGGTGAAAGATGCAGCTGGTGCCGCCAGCGAAGAACTTAAACAAGGCCGGAGCAACGTCAAAGCTCAAC TATCCGACAGCGCACAAGCCGGCTTGGCCGCCGCAGAATTCAGCACCGCAGCAGCTAAAGAACAGGTAGACGCTCTGATG GACAAAGGTCGTAACCTACTTGACAGCGCTGCCGAGCTCATTCGAGAACGACCTCTCACCTCATTGGGCGTGGCTTTGGC CGCCGGTTGGGTCATTGCTAAGCTTTCAAATAATCACGACAAGTAA
Upstream 100 bases:
>100_bases AGCGTAGACACAGAAACTTGATGCACGACTTACAGTGCTATTCATCGAACGGTACCGGTAAAGTGTGACCGGCCTGCCAC GCTCAACGAAGGAGATCTTA
Downstream 100 bases:
>100_bases GTCAAGTGAACAATCAGGATACTGCCGACCGCGTATCCCAGAGCACTGCGGCTGACGTGAATCCCTCTGACATCCAAGAC AGCGTGGAAACCGTGACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MMNPTNTEHLKDNLNQAGARLKSAALAASEAVKDAAGAASEELKQGRSNVKAQLSDSAQAGLAAAEFSTAAAKEQVDALM DKGRNLLDSAAELIRERPLTSLGVALAAGWVIAKLSNNHDK
Sequences:
>Translated_121_residues MMNPTNTEHLKDNLNQAGARLKSAALAASEAVKDAAGAASEELKQGRSNVKAQLSDSAQAGLAAAEFSTAAAKEQVDALM DKGRNLLDSAAELIRERPLTSLGVALAAGWVIAKLSNNHDK >Mature_121_residues MMNPTNTEHLKDNLNQAGARLKSAALAASEAVKDAAGAASEELKQGRSNVKAQLSDSAQAGLAAAEFSTAAAKEQVDALM DKGRNLLDSAAELIRERPLTSLGVALAAGWVIAKLSNNHDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12553; Mature: 12553
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNPTNTEHLKDNLNQAGARLKSAALAASEAVKDAAGAASEELKQGRSNVKAQLSDSAQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GLAAAEFSTAAAKEQVDALMDKGRNLLDSAAELIRERPLTSLGVALAAGWVIAKLSNNHD HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC K C >Mature Secondary Structure MMNPTNTEHLKDNLNQAGARLKSAALAASEAVKDAAGAASEELKQGRSNVKAQLSDSAQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GLAAAEFSTAAAKEQVDALMDKGRNLLDSAAELIRERPLTSLGVALAAGWVIAKLSNNHD HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA