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The map label for this gene is rimP

Identifier: 182680748

GI number: 182680748

Start: 242070

End: 242669

Strand: Direct

Name: rimP

Synonym: XfasM23_0177

Alternate gene names: 182680748

Gene position: 242070-242669 (Clockwise)

Preceding gene: 182680747

Following gene: 182680749

Centisome position: 9.55

GC content: 48.83

Gene sequence:

>600_bases
GTGAGTGACAAAGGCATTGAAATTGTGAATCTGTTGGCGCCAAAGGTCGAGATGCTTGGGTTCGACCTGCTTGGTGCTGA
GTATCTTCTTGTGCCAAGTGGCGCTATTTTGCGACTATACATTGATATCCCGTTTGCTATGCAGCCAGAGTGCATGGTAA
GCATTGATGATTGTGAGCGCGTGAGCCGTGAGGTATCGGCGTATTTAGACCTTGAAGAACCTATCAGCGGCAATTACACG
TTGGAAGTGTCCTCTCCAGGTTTGGATCGCCGACTTTTCACACTGGAGCAATTTGCCCGTCACCATAACCACCTTGTTAA
GGTTGGATTGAAGTTGCAACAGCATGGATCTCGTCGCTTGCAGGGAAAGATTGTGCGTGTTGAACAAGTGGGTGGTTTTG
TTGTCTTGCTTGTCAATGGTGTTGAGCTGGCTGTGGATTTTAACAATATTGATAAGGCTCGGATTGTCCCTGACTGGAGC
GCGCTAGGCTTGGCGCCGCTAGAAAAAAGTAAGCATGACACGAAAAAAATGAGTCAAGGCAGCAAAAAACCATCCAACGA
GTCGGCGGCACGGCAAGCCGTGCGTGGAGTGATCAGATGA

Upstream 100 bases:

>100_bases
TGCAATGGGCCCGAGTGGCCCTTTGCTATTTTTGTATCATCAGTGATGTGTGCATCATTTTTCAGCAGGACGTAGTAATT
CAATTGGATTAAGGCAATCT

Downstream 100 bases:

>100_bases
GCAAGGAACTTTTATTGGTAGTTGATGTGGTCGCTAACGAAAAGGGTGTTCCACGCCAGATCATCTTTGATGCCATTGAG
GTTGCGTTGGCGTCGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSDKGIEIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVSAYLDLEEPISGNYT
LEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVRVEQVGGFVVLLVNGVELAVDFNNIDKARIVPDWS
ALGLAPLEKSKHDTKKMSQGSKKPSNESAARQAVRGVIR

Sequences:

>Translated_199_residues
MSDKGIEIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVSAYLDLEEPISGNYT
LEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVRVEQVGGFVVLLVNGVELAVDFNNIDKARIVPDWS
ALGLAPLEKSKHDTKKMSQGSKKPSNESAARQAVRGVIR
>Mature_198_residues
SDKGIEIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVSAYLDLEEPISGNYTL
EVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVRVEQVGGFVVLLVNGVELAVDFNNIDKARIVPDWSA
LGLAPLEKSKHDTKKMSQGSKKPSNESAARQAVRGVIR

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=159, Percent_Identity=38.9937106918239, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_XYLF2 (B2I724)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001828908.1
- GeneID:   6202568
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_0177
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 22074; Mature: 21943

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKGIEIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCER
CCCCCHHHHHHHHCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCEEEEHHHHHH
VSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRL
HHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECHHHHHCCCCCC
QGKIVRVEQVGGFVVLLVNGVELAVDFNNIDKARIVPDWSALGLAPLEKSKHDTKKMSQG
CCEEEEEEECCCEEEEEEECEEEEEECCCCCCEEECCCCHHCCCCCCCCCHHHHHHHHCC
SKKPSNESAARQAVRGVIR
CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SDKGIEIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCER
CCCCHHHHHHHHCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCEEEEHHHHHH
VSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRL
HHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECHHHHHCCCCCC
QGKIVRVEQVGGFVVLLVNGVELAVDFNNIDKARIVPDWSALGLAPLEKSKHDTKKMSQG
CCEEEEEEECCCEEEEEEECEEEEEECCCCCCEEECCCCHHCCCCCCCCCHHHHHHHHCC
SKKPSNESAARQAVRGVIR
CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA