Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is pgi
Identifier: 182680747
GI number: 182680747
Start: 238795
End: 240303
Strand: Direct
Name: pgi
Synonym: XfasM23_0176
Alternate gene names: 182680747
Gene position: 238795-240303 (Clockwise)
Preceding gene: 182680746
Following gene: 182680748
Centisome position: 9.42
GC content: 51.42
Gene sequence:
>1509_bases ATGCACAATGGGTTCGATGCTTTGCAGCTTCATGCCAATCGCTTGCGTGGGGTGACAATTCCAGATCTGTTGGCTGCTGA GCTAAAAAGACCAGAGCAATATGCCAGACAAGTTGGTCCGTTGTATTTCAACTTTGCTCGGCAGAAGTATGACTGTGTGG CGTTGGAAGCACTGTTTGCATTGGCGCGAAACCATAATGTGACTGGTGCGTTCCAGCGCATGTTTTGTGGGGAGCAGGTC AATGTGACCGAGGGGCGTGCCGTGCTGCATACTGCGCTGCGCGGTGATCTTAGTGGTACTTCGGTGGCGGTTGCTGCTTA CACGGCGGCTGCTAAAGTGCGCGAGCGAATGTATGCGTTGATTGCCGGGCTGGATGCCAGTGAGGTGACCGATATTGTTA GTGTTGGCATTGGGGGCTCGGATCTTGGGCCACGTTTAGTAGTTGATGCGTTGCGTCCGATTTCCCAAGGACGTTTCCGA GTCCATTTTGTCTCTAATGTTGATGGCGCTGCTATGCGGCGTACTCTGGATATGTTGGATCCATCACGTACGGCAGGCAT TCTCATCTCCAAGACCTTTGGTACGCAGGAGACGTTGCTCAACGGTCGTATTTTGTACGATTGGTTAGGCGGCAGTGAGC GCTTATATGCGGTCACTGCTAATCCGGAACGGGCCGCTAATGCGTTCGACATTGTACCCACGCAGGTTTTGCCAATCTGG GATTGGGTGGGTGGACGCTATTCTTTATGGTCAGCAGTTGGTTTCCCGATTGCGTTGGCGATTGGTTCTCAACGTTTTGA GGAGTTGCTGGCTGGTGCGGCTGAGTTTGATGCGTATGCCCTGAGGGTGCCGTTAGAAGAAAATGTTGCGGTGTTGCATG GGTTAACTGCGGTGTGGAACCGTAACTTCCTTGGTTGCGCCACGTATGCGGTGATGGCTTATGACCAGCGCTTGGCATTG CTCCCTACCTACTTGCAGCAACTGGTGATGGAAAGTTTGGGTAAGCGGGTTAAGTGCGACGGAACGCCAGTGGATAGGGA TACTGTTCCAGTTTGGTGGGGTGGCGTGGGGACTGATGTGCAGCATAGTTTTTTCCAGGCGCTGCATCAGGGGACAAATA TCGTACCTGCTGACTTTATCGGTACGATCCGCAATGATGATCTGTACACTGAGAATCATTTTGCTTTGAATGCCAACTTG CTGGCTCAGATTGAAGTGTTAGCGAACGGCCAGCTTAGCGATAATCCGCATCGTGTTTATCCAGGAGGGAATCCGAGTAC GTTGATTTTGCTTGATGCATTGACTCCACAGGCATTGGGGGGATTGATTGCGATGTATGAGCATAGTGTGTATGTGCAGT CAGTGATTTGGGGTATTAATGCGTTTGATCAGTTTGGTGTGGAGTTGGGAAAGCATTTAGCCGTTCAATTACTACCTGCA TTAAAGGGGGAGAGTGTTGAAGTGGCGGATCCAGTAACGCGTGCGGTGTTGCTGCGTTTGCGTGGTTGA
Upstream 100 bases:
>100_bases GGACGAGGCAGCAGTTTTCAGACCGAATTTGGTATACGTCAATGCTGCCAATGCGATGACTCATACCAACCACAGTATTC CTACACAGGTCGCATGACAC
Downstream 100 bases:
>100_bases GTGTTGTAGCGACGTTATGATTAGGAATGAAGTCTAAGTTAAGCATCAGTTTGCCACTCTGGTTGCTTTTATTGATGCAG TTCGTGAGTACGTGCAATGC
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MHNGFDALQLHANRLRGVTIPDLLAAELKRPEQYARQVGPLYFNFARQKYDCVALEALFALARNHNVTGAFQRMFCGEQV NVTEGRAVLHTALRGDLSGTSVAVAAYTAAAKVRERMYALIAGLDASEVTDIVSVGIGGSDLGPRLVVDALRPISQGRFR VHFVSNVDGAAMRRTLDMLDPSRTAGILISKTFGTQETLLNGRILYDWLGGSERLYAVTANPERAANAFDIVPTQVLPIW DWVGGRYSLWSAVGFPIALAIGSQRFEELLAGAAEFDAYALRVPLEENVAVLHGLTAVWNRNFLGCATYAVMAYDQRLAL LPTYLQQLVMESLGKRVKCDGTPVDRDTVPVWWGGVGTDVQHSFFQALHQGTNIVPADFIGTIRNDDLYTENHFALNANL LAQIEVLANGQLSDNPHRVYPGGNPSTLILLDALTPQALGGLIAMYEHSVYVQSVIWGINAFDQFGVELGKHLAVQLLPA LKGESVEVADPVTRAVLLRLRG
Sequences:
>Translated_502_residues MHNGFDALQLHANRLRGVTIPDLLAAELKRPEQYARQVGPLYFNFARQKYDCVALEALFALARNHNVTGAFQRMFCGEQV NVTEGRAVLHTALRGDLSGTSVAVAAYTAAAKVRERMYALIAGLDASEVTDIVSVGIGGSDLGPRLVVDALRPISQGRFR VHFVSNVDGAAMRRTLDMLDPSRTAGILISKTFGTQETLLNGRILYDWLGGSERLYAVTANPERAANAFDIVPTQVLPIW DWVGGRYSLWSAVGFPIALAIGSQRFEELLAGAAEFDAYALRVPLEENVAVLHGLTAVWNRNFLGCATYAVMAYDQRLAL LPTYLQQLVMESLGKRVKCDGTPVDRDTVPVWWGGVGTDVQHSFFQALHQGTNIVPADFIGTIRNDDLYTENHFALNANL LAQIEVLANGQLSDNPHRVYPGGNPSTLILLDALTPQALGGLIAMYEHSVYVQSVIWGINAFDQFGVELGKHLAVQLLPA LKGESVEVADPVTRAVLLRLRG >Mature_502_residues MHNGFDALQLHANRLRGVTIPDLLAAELKRPEQYARQVGPLYFNFARQKYDCVALEALFALARNHNVTGAFQRMFCGEQV NVTEGRAVLHTALRGDLSGTSVAVAAYTAAAKVRERMYALIAGLDASEVTDIVSVGIGGSDLGPRLVVDALRPISQGRFR VHFVSNVDGAAMRRTLDMLDPSRTAGILISKTFGTQETLLNGRILYDWLGGSERLYAVTANPERAANAFDIVPTQVLPIW DWVGGRYSLWSAVGFPIALAIGSQRFEELLAGAAEFDAYALRVPLEENVAVLHGLTAVWNRNFLGCATYAVMAYDQRLAL LPTYLQQLVMESLGKRVKCDGTPVDRDTVPVWWGGVGTDVQHSFFQALHQGTNIVPADFIGTIRNDDLYTENHFALNANL LAQIEVLANGQLSDNPHRVYPGGNPSTLILLDALTPQALGGLIAMYEHSVYVQSVIWGINAFDQFGVELGKHLAVQLLPA LKGESVEVADPVTRAVLLRLRG
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Homo sapiens, GI18201905, Length=487, Percent_Identity=39.4250513347023, Blast_Score=350, Evalue=1e-96, Organism=Homo sapiens, GI296080693, Length=460, Percent_Identity=39.1304347826087, Blast_Score=323, Evalue=2e-88, Organism=Escherichia coli, GI1790457, Length=535, Percent_Identity=37.7570093457944, Blast_Score=351, Evalue=6e-98, Organism=Caenorhabditis elegans, GI71996708, Length=524, Percent_Identity=36.4503816793893, Blast_Score=318, Evalue=5e-87, Organism=Caenorhabditis elegans, GI71996703, Length=524, Percent_Identity=36.2595419847328, Blast_Score=317, Evalue=6e-87, Organism=Saccharomyces cerevisiae, GI6319673, Length=531, Percent_Identity=35.4048964218456, Blast_Score=315, Evalue=1e-86, Organism=Drosophila melanogaster, GI24651916, Length=522, Percent_Identity=36.9731800766284, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24651914, Length=522, Percent_Identity=36.9731800766284, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI17737445, Length=522, Percent_Identity=36.9731800766284, Blast_Score=337, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_XYLF2 (B2I723)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001828907.1 - ProteinModelPortal: B2I723 - SMR: B2I723 - GeneID: 6201920 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_0176 - HOGENOM: HBG352954 - OMA: GPKIVSQ - ProtClustDB: PRK00179 - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 - Gene3D: G3DSA:1.10.1390.10 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 54792; Mature: 54792
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 362-362 ACT_SITE 471-471
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNGFDALQLHANRLRGVTIPDLLAAELKRPEQYARQVGPLYFNFARQKYDCVALEALFA CCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHCHHHHHHHHHHH LARNHNVTGAFQRMFCGEQVNVTEGRAVLHTALRGDLSGTSVAVAAYTAAAKVRERMYAL HHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH IAGLDASEVTDIVSVGIGGSDLGPRLVVDALRPISQGRFRVHFVSNVDGAAMRRTLDMLD HHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCC PSRTAGILISKTFGTQETLLNGRILYDWLGGSERLYAVTANPERAANAFDIVPTQVLPIW CCCCCCEEEEECCCCHHHHHCCEEEEEECCCCCEEEEEECCCHHHCCCEECCCCCEEEHH DWVGGRYSLWSAVGFPIALAIGSQRFEELLAGAAEFDAYALRVPLEENVAVLHGLTAVWN HCCCCCHHHHHHHCCHHEEHHHHHHHHHHHCCHHCCCEEEEEECCCCCHHHHHHHHHHHC RNFLGCATYAVMAYDQRLALLPTYLQQLVMESLGKRVKCDGTPVDRDTVPVWWGGVGTDV CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCHH QHSFFQALHQGTNIVPADFIGTIRNDDLYTENHFALNANLLAQIEVLANGQLSDNPHRVY HHHHHHHHHCCCCCCCHHHHHCCCCCCCEECCEEEECCCCEEEEEEEECCCCCCCCCEEC PGGNPSTLILLDALTPQALGGLIAMYEHSVYVQSVIWGINAFDQFGVELGKHLAVQLLPA CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LKGESVEVADPVTRAVLLRLRG CCCCCEECCCHHHHHHHHHCCC >Mature Secondary Structure MHNGFDALQLHANRLRGVTIPDLLAAELKRPEQYARQVGPLYFNFARQKYDCVALEALFA CCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHCHHHHHHHHHHH LARNHNVTGAFQRMFCGEQVNVTEGRAVLHTALRGDLSGTSVAVAAYTAAAKVRERMYAL HHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH IAGLDASEVTDIVSVGIGGSDLGPRLVVDALRPISQGRFRVHFVSNVDGAAMRRTLDMLD HHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCC PSRTAGILISKTFGTQETLLNGRILYDWLGGSERLYAVTANPERAANAFDIVPTQVLPIW CCCCCCEEEEECCCCHHHHHCCEEEEEECCCCCEEEEEECCCHHHCCCEECCCCCEEEHH DWVGGRYSLWSAVGFPIALAIGSQRFEELLAGAAEFDAYALRVPLEENVAVLHGLTAVWN HCCCCCHHHHHHHCCHHEEHHHHHHHHHHHCCHHCCCEEEEEECCCCCHHHHHHHHHHHC RNFLGCATYAVMAYDQRLALLPTYLQQLVMESLGKRVKCDGTPVDRDTVPVWWGGVGTDV CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCHH QHSFFQALHQGTNIVPADFIGTIRNDDLYTENHFALNANLLAQIEVLANGQLSDNPHRVY HHHHHHHHHCCCCCCCHHHHHCCCCCCCEECCEEEECCCCEEEEEEEECCCCCCCCCEEC PGGNPSTLILLDALTPQALGGLIAMYEHSVYVQSVIWGINAFDQFGVELGKHLAVQLLPA CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LKGESVEVADPVTRAVLLRLRG CCCCCEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA