Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680732
Identifier: 182680732
GI number: 182680732
Start: 220402
End: 221124
Strand: Direct
Name: 182680732
Synonym: XfasM23_0161
Alternate gene names: NA
Gene position: 220402-221124 (Clockwise)
Preceding gene: 182680731
Following gene: 182680733
Centisome position: 8.69
GC content: 52.14
Gene sequence:
>723_bases GTGAGTGCATTATCTCCATCTTTGCGCGAGGATGCGCCATTAGTTGTCTTTGATTTCGATCATACGTTGTACGATGGCGA TTCTGGCAGTGATTTGTTCGCTTGGTTGATGCTGCGTAATCCGCTGCGCTTGCTGGTAGCACTTCTAGTGACGCCTTTAC TGGGCCCGTTGGTCGCAATGCTGGCGACGCGGCGCCGTAGTCTTTCCTGTTACGTTTGGATTGCTACCTTTGGCATGCGC TATACGCATGAGTTCAATAAGGTCATCAGGGATTATGTGCGAGGACATGCGTCGCAGATCCGCAAGCGCTTATTACCGAA GGCGTTGGAAGTATTTGCGTCCCATCGTATTGCTGGAGATTGTGTGGTGGTGGCCACTGGTGCTCCTCCTGAACTGGTAA GGGAAATCCTGGCTTTGGTAGCTGATCAGCAGGAGGTGGTGCCTGTGATTGGCAGTTCTATCGTGCCGCGTTTGGGGGCA ATCATTGTTGCTCGTCATTGCCACCATGAGGAAAAAATGCGGATGCTCCGTGAACAGGGCTATGGTGATGTTGCTGTGGC GTATTCGGATAGTACTGCAGATTTACCGTTACTTATGGCAGCAAAGGTACCCGTGGTGGTGAATCCCAAGCCCAAGCGTG AAAAATTGTTCCGTAGGGTGTTGCAGCCGGGTACATCAATCATTCACTGGGGATGTCCTCGCCGTGGAGGCGCTTGCGAT TAG
Upstream 100 bases:
>100_bases AACGGTTGCGTGCTGCGGGTGTGAATGCGTTTCTTGTTGGTGAGGCGTTTATGCGTGCGGCTGAACCTGGTGAGTCACTC AGAGAGATGTTCTTCATCAC
Downstream 100 bases:
>100_bases GGTGAGGCAAGTATTCGTTGTGTTGAGATGTCTATCTGGAAGTGAGCATATGGAGATCGCAGCAGCACAATTGGAGCAGG TTGGTTGCACACTGTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSALSPSLREDAPLVVFDFDHTLYDGDSGSDLFAWLMLRNPLRLLVALLVTPLLGPLVAMLATRRRSLSCYVWIATFGMR YTHEFNKVIRDYVRGHASQIRKRLLPKALEVFASHRIAGDCVVVATGAPPELVREILALVADQQEVVPVIGSSIVPRLGA IIVARHCHHEEKMRMLREQGYGDVAVAYSDSTADLPLLMAAKVPVVVNPKPKREKLFRRVLQPGTSIIHWGCPRRGGACD
Sequences:
>Translated_240_residues MSALSPSLREDAPLVVFDFDHTLYDGDSGSDLFAWLMLRNPLRLLVALLVTPLLGPLVAMLATRRRSLSCYVWIATFGMR YTHEFNKVIRDYVRGHASQIRKRLLPKALEVFASHRIAGDCVVVATGAPPELVREILALVADQQEVVPVIGSSIVPRLGA IIVARHCHHEEKMRMLREQGYGDVAVAYSDSTADLPLLMAAKVPVVVNPKPKREKLFRRVLQPGTSIIHWGCPRRGGACD >Mature_239_residues SALSPSLREDAPLVVFDFDHTLYDGDSGSDLFAWLMLRNPLRLLVALLVTPLLGPLVAMLATRRRSLSCYVWIATFGMRY THEFNKVIRDYVRGHASQIRKRLLPKALEVFASHRIAGDCVVVATGAPPELVREILALVADQQEVVPVIGSSIVPRLGAI IVARHCHHEEKMRMLREQGYGDVAVAYSDSTADLPLLMAAKVPVVVNPKPKREKLFRRVLQPGTSIIHWGCPRRGGACD
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26639; Mature: 26507
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALSPSLREDAPLVVFDFDHTLYDGDSGSDLFAWLMLRNPLRLLVALLVTPLLGPLVAM CCCCCCCHHCCCCEEEEECCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH LATRRRSLSCYVWIATFGMRYTHEFNKVIRDYVRGHASQIRKRLLPKALEVFASHRIAGD HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC CVVVATGAPPELVREILALVADQQEVVPVIGSSIVPRLGAIIVARHCHHEEKMRMLREQG EEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC YGDVAVAYSDSTADLPLLMAAKVPVVVNPKPKREKLFRRVLQPGTSIIHWGCPRRGGACD CCCEEEEECCCCCCCCCHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCC >Mature Secondary Structure SALSPSLREDAPLVVFDFDHTLYDGDSGSDLFAWLMLRNPLRLLVALLVTPLLGPLVAM CCCCCCHHCCCCEEEEECCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH LATRRRSLSCYVWIATFGMRYTHEFNKVIRDYVRGHASQIRKRLLPKALEVFASHRIAGD HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC CVVVATGAPPELVREILALVADQQEVVPVIGSSIVPRLGAIIVARHCHHEEKMRMLREQG EEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC YGDVAVAYSDSTADLPLLMAAKVPVVVNPKPKREKLFRRVLQPGTSIIHWGCPRRGGACD CCCEEEEECCCCCCCCCHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA