Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is cysQ [H]
Identifier: 182680711
GI number: 182680711
Start: 195290
End: 196090
Strand: Reverse
Name: cysQ [H]
Synonym: XfasM23_0140
Alternate gene names: 182680711
Gene position: 196090-195290 (Counterclockwise)
Preceding gene: 182680712
Following gene: 182680710
Centisome position: 7.73
GC content: 55.06
Gene sequence:
>801_bases GTGATCACTATTCCCAGCGATCTTCACGAATCGGTCATCGCCATTGCTACAGATTCCGGCAGAGCGATCATGAAGATCTA TCAGGATCATTTCAAGGTCCAGATCAAAGCAGACATGAGTCCACTGACGCAGGCCGATTTAATCTCACATCAGATCATCG TGCATGGACTCAAGCAACTGACCCCCAGTCTGCCCGTGTTGTCGGAAGAGTCGACAGGAATCACTTGGGAGGAACGCCGT CACTGGAAGAGCTACTGGTTGGTCGATCCACTCGACGGCACCCGCGAATTTGTGAAACGCAATGGCGAGTTTTGCATAAA CATCGCACTGATCCATGAAGGTATCCCCGTATATGGAATGATCCTGGCGCCGGTGGAAGGGACCATCTGGCATGCAATGC ATGGCGGGCAGGCATTCCGCCGTGATGGTCACCGTGATACCACATTGCACGTGCGGGCACCTGCTGGCACCGCGTTACAG GTCGCAGCAAGCCGGTCGCACATTGATGTGCACACCTCGGCGTTACTGGCACAGATGAAAGAAATAACTCTAGTTTCGCA GGGATCGGCGCTGAAGTTCTGTCGCCTTGCTGAAGGCACACTCGACGTGTACCCGCGTCTAGGCGCTACCTATGAGTGGG ATACTGCCGCAGGCCAGTGCTTACTGCTTGCTGCGGGCGGTACGCTACTGAACATTGAGACTGGAAAACCGTTCCGCTAC AACAAACGCGAGACACTGCTTAACGGCGGTTTTATCGCACTGGGCGACGCCACGCTGCCTTGGCGCGATTGGTTGCCCTG A
Upstream 100 bases:
>100_bases AGCTTTCAAAGTTGCACGATTTGATGCTGCGTGAGGATTTCTCCGAAGGGCGCTCCCTGGCAGCATTGTTCATTGTCCGT GAATGGCTGGAACATCAGCA
Downstream 100 bases:
>100_bases CTCCATCTTATTCCCCATTCTGGCGCTTTCCGTATGTCCGATCTTCCCGACGCATCACCCCACATTGAAACGTTGCTATC CATCATGGCGCGCCTGCGCG
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MITIPSDLHESVIAIATDSGRAIMKIYQDHFKVQIKADMSPLTQADLISHQIIVHGLKQLTPSLPVLSEESTGITWEERR HWKSYWLVDPLDGTREFVKRNGEFCINIALIHEGIPVYGMILAPVEGTIWHAMHGGQAFRRDGHRDTTLHVRAPAGTALQ VAASRSHIDVHTSALLAQMKEITLVSQGSALKFCRLAEGTLDVYPRLGATYEWDTAAGQCLLLAAGGTLLNIETGKPFRY NKRETLLNGGFIALGDATLPWRDWLP
Sequences:
>Translated_266_residues MITIPSDLHESVIAIATDSGRAIMKIYQDHFKVQIKADMSPLTQADLISHQIIVHGLKQLTPSLPVLSEESTGITWEERR HWKSYWLVDPLDGTREFVKRNGEFCINIALIHEGIPVYGMILAPVEGTIWHAMHGGQAFRRDGHRDTTLHVRAPAGTALQ VAASRSHIDVHTSALLAQMKEITLVSQGSALKFCRLAEGTLDVYPRLGATYEWDTAAGQCLLLAAGGTLLNIETGKPFRY NKRETLLNGGFIALGDATLPWRDWLP >Mature_266_residues MITIPSDLHESVIAIATDSGRAIMKIYQDHFKVQIKADMSPLTQADLISHQIIVHGLKQLTPSLPVLSEESTGITWEERR HWKSYWLVDPLDGTREFVKRNGEFCINIALIHEGIPVYGMILAPVEGTIWHAMHGGQAFRRDGHRDTTLHVRAPAGTALQ VAASRSHIDVHTSALLAQMKEITLVSQGSALKFCRLAEGTLDVYPRLGATYEWDTAAGQCLLLAAGGTLLNIETGKPFRY NKRETLLNGGFIALGDATLPWRDWLP
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=242, Percent_Identity=23.1404958677686, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI221625487, Length=242, Percent_Identity=23.1404958677686, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1790659, Length=244, Percent_Identity=46.3114754098361, Blast_Score=190, Evalue=7e-50, Organism=Escherichia coli, GI1788882, Length=230, Percent_Identity=24.3478260869565, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71995897, Length=246, Percent_Identity=29.6747967479675, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71995905, Length=246, Percent_Identity=29.6747967479675, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 29467; Mature: 29467
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIPSDLHESVIAIATDSGRAIMKIYQDHFKVQIKADMSPLTQADLISHQIIVHGLKQL CCCCCCHHCCCEEEEEECCCHHHHHEEHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHH TPSLPVLSEESTGITWEERRHWKSYWLVDPLDGTREFVKRNGEFCINIALIHEGIPVYGM CCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHCCCCEEEEEEEEECCCCEEEE ILAPVEGTIWHAMHGGQAFRRDGHRDTTLHVRAPAGTALQVAASRSHIDVHTSALLAQMK EEECCCCEEEEEECCCHHHHCCCCCCCEEEEECCCCCEEEEECCCCCEEHHHHHHHHHHH EITLVSQGSALKFCRLAEGTLDVYPRLGATYEWDTAAGQCLLLAAGGTLLNIETGKPFRY HEEEEECCCCEEEEEECCCCEEECCCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCC NKRETLLNGGFIALGDATLPWRDWLP CCHHHEECCCEEEECCCCCCHHCCCC >Mature Secondary Structure MITIPSDLHESVIAIATDSGRAIMKIYQDHFKVQIKADMSPLTQADLISHQIIVHGLKQL CCCCCCHHCCCEEEEEECCCHHHHHEEHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHH TPSLPVLSEESTGITWEERRHWKSYWLVDPLDGTREFVKRNGEFCINIALIHEGIPVYGM CCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHCCCCEEEEEEEEECCCCEEEE ILAPVEGTIWHAMHGGQAFRRDGHRDTTLHVRAPAGTALQVAASRSHIDVHTSALLAQMK EEECCCCEEEEEECCCHHHHCCCCCCCEEEEECCCCCEEEEECCCCCEEHHHHHHHHHHH EITLVSQGSALKFCRLAEGTLDVYPRLGATYEWDTAAGQCLLLAAGGTLLNIETGKPFRY HEEEEECCCCEEEEEECCCCEEECCCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCC NKRETLLNGGFIALGDATLPWRDWLP CCHHHEECCCEEEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]